Alternatives and similar repositories for PetaKit5D

Users that are interested in PetaKit5D are comparing it to the libraries listed below

• mobie / mobie
  MultiModal Big Image Data Sharing and Exploration
  ☆17Updated 2 years ago
• multiview-stitcher / multiview-stitcher
  A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
  ☆88Updated last week
• constantinpape / pybdv
  python tools for BigDataViewer
  ☆22Updated 9 months ago
• ekatrukha / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆30Updated last week
• krentzd / napari-clemreg
  An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)
  ☆19Updated this week
• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆58Updated 3 months ago
• haesleinhuepf / napari-workflow-optimizer
  Optimize image processing workflows in napari
  ☆18Updated 5 months ago
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆24Updated last year
• clEsperanto / napari_pyclesperanto_assistant
  GPU-accelerated general purpose image processing and image analysis in napari
  ☆35Updated 5 months ago
• MouseLand / cellpose-napari
  napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool
  ☆59Updated last year
• COSC-Lab / napari-fast4dreg
  dask empowered fast4dreg
  ☆15Updated 11 months ago
• haesleinhuepf / napari-segment-blobs-and-things-with-membranes
  A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…
  ☆29Updated 5 months ago
• neurobiology-ut / PHILOW
  Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
  ☆27Updated 8 months ago
• BiAPoL / napari-clusters-plotter
  A napari plugin for clustering objects according to their properties.
  ☆88Updated last week
• NEUBIAS / training-resources
  Resources for teaching/preparing to teach bioimage analysis
  ☆58Updated 2 weeks ago
• haesleinhuepf / napari-assistant
  ☆33Updated 5 months ago
• haesleinhuepf / human-eval-bia
  Benchmarking Large Language Models for Bio-Image Analysis Code Generation
  ☆23Updated 11 months ago
• clEsperanto / pyclesperanto
  GPU-accelerated Image Processing library for Python
  ☆51Updated this week
• multiview-stitcher / napari-stitcher
  A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher
  ☆16Updated 3 months ago
• fractal-napari-plugins-collection / napari-feature-classifier
  ☆23Updated 4 months ago
• JaneliaSciComp / bigstream
  Tools for distributed alignment of massive images
  ☆87Updated last month
• tlambert03 / pycudadecon
  Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy
  ☆69Updated 3 weeks ago
• CellMigrationLab / Fast4DReg
  Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…
  ☆40Updated 6 months ago
• QI2lab / OPM
  Archived: control, reconstruction, and analysis code for oblique plane microscopy.
  ☆22Updated 6 months ago
• TheDeanLab / navigate
  navigate - open source light-sheet microscope controls
  ☆38Updated this week
• lukasz-migas / napari-plot
  1d plotting in napari-based canvas.
  ☆26Updated last week
• ome / napari-ome-zarr
  A napari plugin for zarr backed OME-NGFF images
  ☆38Updated 2 weeks ago
• yfukai / laptrack
  Particle tracking by solving linear assignment problem.
  ☆58Updated 2 weeks ago
• Sentinal4D / cellshape
  3D shape analysis using deep learning
  ☆28Updated 2 weeks ago
• guiwitz / naparimovie
  Create movies from series of key-frames in napari.
  ☆38Updated 4 years ago