Alternatives and similar repositories for PetaKit5D:

Users that are interested in PetaKit5D are comparing it to the libraries listed below

• fractal-napari-plugins-collection / napari-feature-classifier
  ☆23Updated 6 months ago
• mobie / mobie
  MultiModal Big Image Data Sharing and Exploration
  ☆14Updated 2 years ago
• lacan / microscopy-icons
  Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/
  ☆11Updated 2 years ago
• constantinpape / pybdv
  python tools for BigDataViewer
  ☆22Updated 2 months ago
• ome / napari-ome-zarr
  A napari plugin for zarr backed OME-NGFF images
  ☆32Updated this week
• tlambert03 / pycudadecon
  Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy
  ☆63Updated 2 weeks ago
• napari-threedee / napari-threedee
  A 3D interactivity toolbox for napari
  ☆33Updated 3 months ago
• ekatrukha / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆29Updated last month
• mesoSPIM / mesoSPIM-control
  Image acquisition software for mesoSPIM light-sheet microscopes.
  ☆40Updated last week
• tlambert03 / napari-ndtiffs
  A napari plugin to load & deskew folders of lattice light sheet TIFFs
  ☆12Updated 2 weeks ago
• pylattice / pyLattice
  A python library for advanced lattice light-sheet image analysis
  ☆21Updated 4 years ago
• haesleinhuepf / napari-simpleitk-image-processing
  Process images using SimpleITK in napari
  ☆20Updated 5 months ago
• imagej / napari-imagej
  Use ImageJ functionality from napari
  ☆27Updated this week
• neurobiology-ut / PHILOW
  Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
  ☆26Updated last month
• fmi-faim / napari-psf-analysis
  A napari plugin to analysis point spread functions.
  ☆12Updated 4 months ago
• JaneliaSciComp / BigStitcher-Spark
  Running compute-intense parts of BigStitcher distributed
  ☆24Updated this week
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆23Updated last week
• CellMigrationLab / Fast4DReg
  Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…
  ☆39Updated 3 months ago
• haesleinhuepf / napari-assistant
  ☆24Updated 3 months ago
• clEsperanto / napari_pyclesperanto_assistant
  GPU-accelerated general purpose image processing and image analysis in napari
  ☆35Updated 4 months ago
• haesleinhuepf / napari-segment-blobs-and-things-with-membranes
  A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…
  ☆26Updated 4 months ago
• aelefebv / Mitometer
  Automated mitochondrial segmentation and tracking.
  ☆31Updated 3 years ago
• acquire-project / acquire-python
  Acquire: a multi-camera video streaming software focusing on microscopy
  ☆20Updated 4 months ago
• BIOP / ijp-LaRoMe
  some useful function to get Label from ROIs and vice versa , and more!
  ☆12Updated last year
• krentzd / napari-clemreg
  An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)
  ☆16Updated last week
• nvladimus / npy2bdv
  Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.
  ☆35Updated 6 months ago
• MouseLand / cellpose-napari
  napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool
  ☆52Updated 4 months ago
• NEUBIAS / neubias-springer-book-2021
  The repository of NEUBIAS textbook 2021
  ☆10Updated 3 years ago
• haesleinhuepf / napari-accelerated-pixel-and-object-classification
  GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.
  ☆43Updated last year
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆23Updated 10 months ago