☆55Aug 21, 2026Updated last week
Alternatives and similar repositories for PetaKit5D
Users that are interested in PetaKit5D are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆19Updated this week
- Fusing image tiles with dask array's map_blocks☆31Feb 27, 2024Updated 2 years ago
- A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.☆72Updated this week
- ImageJ convenience layer for N5☆21Jun 29, 2026Updated 2 months ago
- GPU accelerated 3D image deconvolution using CUDA☆39Jul 18, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Main tasks for the Fractal analytics platform☆27Updated this week
- A relabeling tool for tiled segmentation with Dask☆18Sep 24, 2024Updated last year
- A Python toolbox for aligning / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆131Updated this week
- dask empowered fast4dreg☆17Mar 11, 2026Updated 5 months ago
- A Board Game to teach co-localization analysis☆15Nov 1, 2024Updated last year
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆23Apr 1, 2025Updated last year
- Running compute-intense parts of BigStitcher distributed☆30Aug 11, 2026Updated 2 weeks ago
- Rust extension module for FIJI-like colormapping and channel blending☆21Jun 24, 2026Updated 2 months ago
- ☆42May 6, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Import Trackmate XML files in Python as Pandas dataframe☆12Mar 1, 2025Updated last year
- A minimal Python package for reading, writing and validating OME-Zarr (meta)data☆39Updated this week
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Mar 13, 2023Updated 3 years ago
- A napari plugin to view and edit layer metadata☆13Updated this week
- GPU-based 3D non-rigid volumetric registration☆49Aug 26, 2025Updated last year
- python tools for BigDataViewer☆23Jul 2, 2026Updated last month
- Reference implementation of the Graph Exchange File Format☆42Updated this week
- Modern Bio-Formats wrapper with clean lazy Python API☆23Jun 25, 2026Updated 2 months ago
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆18Oct 8, 2025Updated 10 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A writer and reader for NGFF OME-Zarr datasets☆14Nov 2, 2021Updated 4 years ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Jul 26, 2026Updated last month
- Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data☆34Updated this week
- Image registration (alignment) software for large microscopy images☆27Oct 15, 2023Updated 2 years ago
- A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images☆94Mar 5, 2024Updated 2 years ago
- Google Colab notebook for Cellpose☆11Aug 21, 2025Updated last year
- A fully scalable robust image feature extraction library.☆29Updated this week
- Python control of micro-manager for customized data acquisition☆187Jun 17, 2026Updated 2 months ago
- ☆21Aug 17, 2023Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆258Updated this week
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆21May 11, 2026Updated 3 months ago
- Content-adaptive storage and processing of large volumetric microscopy data using the Adaptive Particle Representation (APR)☆21Aug 21, 2024Updated 2 years ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆26Jul 3, 2020Updated 6 years ago
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated last year
- For laying organizational groundwork☆18Jul 12, 2020Updated 6 years ago
- ImageJ plugins for blind decomposition of fluorencence microscopy data☆10Mar 24, 2015Updated 11 years ago