biosal is a distributed BIOlogical Sequence Actor Library.
☆22Apr 28, 2015Updated 11 years ago
Alternatives and similar repositories for biosal
Users that are interested in biosal are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The Dagstuhl Format for Assembly☆13Oct 16, 2017Updated 8 years ago
- Ray -- Parallel genome assemblies for parallel DNA sequencing☆68Jul 26, 2017Updated 9 years ago
- Demonstrating the PRoot program☆11Jul 29, 2016Updated 10 years ago
- A Bayesian method for doing transcriptome assembly from RNA-seq data☆25Feb 2, 2015Updated 11 years ago
- EXPERIMENTAL implementation of side graph☆10Apr 16, 2015Updated 11 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Fast and Accurate Classification of Sequences using Bloom filters☆16Apr 19, 2023Updated 3 years ago
- DNA assembler developed on FER (Croatia), RBI (Croatia) and GIS (Singapore)☆18Jan 18, 2016Updated 10 years ago
- Bremges et al. (2015). GigaScience, 4:33.☆12Dec 29, 2023Updated 2 years ago
- FM-index representation of a de Bruijn graph☆27Aug 7, 2017Updated 9 years ago
- Naive PCA for genotype data☆10Jul 27, 2016Updated 10 years ago
- An extension of Velvet assembler to de novo metagenome assembly from short sequence reads☆15May 29, 2012Updated 14 years ago
- An example of a data analysis pipeline using Make☆17Jul 26, 2016Updated 10 years ago
- Detect contigs of complete circular genomes☆23Jun 6, 2019Updated 7 years ago
- A utility for splitting mixed origin NGS reads☆10Jun 1, 2021Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- in silico plasmid extraction☆13Sep 18, 2017Updated 9 years ago
- ☆11Apr 20, 2018Updated 8 years ago
- A list of weak Bacterial assemblies in GenBank☆18Aug 3, 2017Updated 9 years ago
- Northern Arizona SNP Pipeline☆20Oct 29, 2024Updated last year
- network block device over 9P transport☆25Jul 24, 2015Updated 11 years ago
- extract 454 Genome Sequencer reads from a SFF file and convert them into a FASTQ formatted output☆37Aug 24, 2015Updated 11 years ago
- DEPRECIATED! Please use nf-core/tools instead☆19Aug 8, 2018Updated 8 years ago
- Convenience function for quick and dirty data analysis☆70Oct 30, 2017Updated 8 years ago
- NVBIO is a library of reusable components designed to accelerate bioinformatics applications using CUDA.☆58Aug 21, 2014Updated 12 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- The CRISPR assembler☆35May 13, 2021Updated 5 years ago
- Biopsy - the Bioinformatic Optimisation System☆16Nov 1, 2015Updated 10 years ago
- Flexible genotype query among 30,000+ samples whole-genome☆95Sep 4, 2019Updated 7 years ago
- ☆25May 21, 2021Updated 5 years ago
- Small utility to quickly find size and GC content of a fasta file. Can also extract sequence. Who doesn't like QUICK and DIRTY!☆13Aug 27, 2018Updated 8 years ago
- Manipulate FASTA files☆29Aug 26, 2014Updated 12 years ago
- Pipeline for poreathon☆14Dec 17, 2014Updated 11 years ago
- Pipeline to annotate sequences at different taxonomic levels using NCBI's taxonomy☆19Jul 19, 2013Updated 13 years ago
- Bash script to install gcc-4.9.2 and boost-1.57 on CentOS 5.x, CentOS 6.x and Mac OS X. Languages: c++, c and go. Includes tcmalloc on …☆13May 7, 2016Updated 10 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- SVsim: a tool that generates synthetic Structural Variant calls as benchmarks to test/evaluate SV calling pipelines.☆18Dec 4, 2017Updated 8 years ago
- To tackle the exponentially increasing throughput of Next-Generation Sequencing (NGS), most of the existing short-read aligners can be co…☆31Dec 26, 2023Updated 2 years ago
- AWS lambda S3 + rust-htslib: A serverless bioinformatics example☆14Jun 7, 2022Updated 4 years ago
- Scaffolding genomes using synthetic long read clouds☆20Oct 11, 2016Updated 9 years ago
- A Python wrapper for the bbhash library for Minimal Perfect Hashing☆18Oct 26, 2025Updated 11 months ago
- Virus metagenomic pipeline for unknown host or in absence of a host genome☆18Sep 19, 2019Updated 7 years ago
- A set of programs for the taxonomic analysis of genetic sequences☆15Jun 12, 2023Updated 3 years ago