Biopsy - the Bioinformatic Optimisation System
☆16Nov 1, 2015Updated 10 years ago
Alternatives and similar repositories for biopsy
Users that are interested in biopsy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Automated optimisation of de-novo transcriptome assembly☆25Nov 11, 2015Updated 10 years ago
- Pipeline for poreathon☆14Dec 17, 2014Updated 11 years ago
- De novo genome assembler.☆12Jul 30, 2018Updated 8 years ago
- The Dagstuhl Format for Assembly☆13Oct 16, 2017Updated 9 years ago
- A universal genomic coordinate translator for comparative genomics☆12Jul 6, 2017Updated 9 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- User-friendly tool to quickly go from 16S rRNA sequence data to an OTU matrix☆10Apr 16, 2014Updated 12 years ago
- ☆16Jun 26, 2013Updated 13 years ago
- A tool for creating resource prediction models for scientific workflows☆13Feb 27, 2024Updated 2 years ago
- Various scripts and recipes for working with nanopore data☆36Apr 17, 2016Updated 10 years ago
- Provides access to complex Bioinformatics software (even BioLinux!) in just one command.☆75Jun 28, 2017Updated 9 years ago
- Little sequence file utilities meant to work within Unix pipelines☆36Jan 20, 2015Updated 11 years ago
- The 3rd incarnation of the Wise package for sequence analysis☆23Jun 19, 2014Updated 12 years ago
- Transcript to Genome Consistency Network☆16Jun 19, 2012Updated 14 years ago
- Manipulate FASTA files☆29Aug 26, 2014Updated 12 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Streaming algorithm for computing kmer statistics for massive genomics datasets☆54Feb 18, 2020Updated 6 years ago
- An Ansible playbook to automatize the deployment of a Biostar-based project using Docker containers☆10Nov 21, 2014Updated 11 years ago
- Biological Graphic tool in Python☆34May 14, 2020Updated 6 years ago
- Genomic Assemblies Merger for NGS☆26Nov 10, 2023Updated 2 years ago
- ☆15Aug 28, 2014Updated 12 years ago
- Homebrew repository for CloudBioLinux: incubator for formulas to end up in homebrew-science☆19Oct 17, 2016Updated 10 years ago
- Big data bioinformatics repository☆11May 21, 2014Updated 12 years ago
- A collection of utilities for working with next generation (MPS) sequencing data in Groovy☆15Sep 25, 2026Updated last month
- Benchmark MinION assembler pipelines and publish your results in a heartbeat!☆15Feb 11, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Reproducible Phylogenomics☆22Jun 28, 2016Updated 10 years ago
- de Bruijn graph cOrrectiOn from graph aLignment☆11Jul 20, 2020Updated 6 years ago
- A NGS data analysis pipeline with emphasis on SNP detection☆11Nov 22, 2016Updated 9 years ago
- ☆18Feb 16, 2026Updated 8 months ago
- Streamable FASTA parser.☆14May 18, 2026Updated 5 months ago
- Miniature LIMS and workflow manager for bioinformatics☆41Aug 17, 2011Updated 15 years ago
- a rust library for high throughput binary encoding of genomic sequences☆12Aug 26, 2026Updated 2 months ago
- Tool (experimental) to compute layout from overlaps with spectral algorithm☆11Nov 28, 2017Updated 8 years ago
- Welcome to Physcraper’s repository! Automatic gene tree updating using the Open Tree of Life.☆13May 13, 2022Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Scaffolding of genomic assemblies with RNA seq data☆15Oct 8, 2015Updated 11 years ago
- Genetic coordinates so simple, it feels like MAGIC!☆10Jan 29, 2026Updated 9 months ago
- A pipeline to assess the quantification of transcripts.☆19Jun 6, 2022Updated 4 years ago
- Sample an approximate number of reads from a fastq file without reading the entire file☆11Jun 20, 2017Updated 9 years ago
- ☆53May 11, 2021Updated 5 years ago
- Parallel Recipes : parallel workflow execution made easy☆13Sep 1, 2015Updated 11 years ago
- Lightweight String Graph Construction☆11May 10, 2023Updated 3 years ago