indraniel / sff2fastqLinks
extract 454 Genome Sequencer reads from a SFF file and convert them into a FASTQ formatted output
☆37Updated 10 years ago
Alternatives and similar repositories for sff2fastq
Users that are interested in sff2fastq are comparing it to the libraries listed below
Sorting:
- The Dazzler Data Base☆36Updated 10 months ago
- ☆63Updated 5 years ago
- PrimerTree: Visually Assessing the Specificity and Informativeness of Primer Pairs☆52Updated 2 months ago
- Computational workflows for metagenomics tasks, by the Bhatt lab☆47Updated 2 years ago
- Code for nanopore paper☆33Updated 10 years ago
- YAMP: Yet Another Metagenomic Pipeline☆62Updated 2 years ago
- Flexible circular visualization of genome-associated data with BioPerl and SVG.☆47Updated 6 years ago
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Updated 7 years ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …☆47Updated 3 years ago
- Merge transcriptome assemblies☆31Updated 9 years ago
- Assembly based core genome SNP alignments for bacteria☆25Updated 6 years ago
- Multilocus sequence typing by blast using the schemes from PubMLST☆30Updated 3 years ago
- Python HyPhy: Facilitating HyPhy execution and parsing☆21Updated 4 years ago
- Visualize whole genome alignments as linear maps☆74Updated 5 months ago
- Scripts and programs for the Holt Lab's MinION desktop☆32Updated 5 years ago
- transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation☆28Updated last year
- OPAL: Open-community Profiling Assessment tooL☆30Updated 11 months ago
- Public Health England SNP calling pipeline.☆37Updated 7 years ago
- Find Unique genomic Regions☆32Updated 2 months ago
- A toolkit for annotation of transposable element families from unassembled sequence reads☆31Updated 2 weeks ago
- VIRULIGN: fast codon-correct alignment and annotation of viral genomes☆35Updated 4 years ago
- Tutorial for bacterial GWAS pipline and bugwas, created for Bodega Bay 2016 NGS workshop☆18Updated 9 years ago
- A nextflow pipeline for decontamination of short reads, long reads and contigs☆55Updated 6 months ago
- Maximum likelihood demultiplexing☆50Updated 10 months ago
- A Nextflow workflow for QC, evaluation, and profiling of metagenomic samples using short- and long-read technologies☆37Updated 2 years ago
- Miscellaneous Bioinformatics scripts etc mostly in Python☆45Updated this week
- A high throughput sequence read toolset using a streaming approach facilitated by Linux pipes☆51Updated 11 months ago
- ☆23Updated 7 years ago
- Pipeline to generate NGS reads from a phylogeny☆39Updated 3 years ago
- Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data☆31Updated 3 months ago