Alternatives and similar repositories for xenomapper:

Users that are interested in xenomapper are comparing it to the libraries listed below

• ngs-docs / 2015-nov-adv-rna
  ☆18Updated 9 years ago
• koelling / dnacol
  Color DNA/RNA bases in terminal output
  ☆21Updated 7 years ago
• nickloman / ebov
  Ebola virus surveillance
  ☆16Updated 8 years ago
• weissmanlab / magic
  Minimal Assumption Genomic Inference of Coalescence
  ☆14Updated last year
• mreppell / Karp
  Accurate and fast taxonomic classification using pseudoaligning
  ☆21Updated 7 years ago
• COMBINE-lab / shoal
  Improved multi-sample transcript abundance estimates using adaptive priors
  ☆20Updated 6 years ago
• vice87 / gam-ngs
  Genomic Assemblies Merger for NGS
  ☆26Updated last year
• DRL / blobtools-light
  Light version blobtools package - NO LONGER MAINTAINED! DO NOT USE!
  ☆8Updated 9 years ago
• nickloman / poredb
  ☆19Updated 8 years ago
• jbelyeu / unfazed
  Unfazed by genomic variant phasing
  ☆26Updated 11 months ago
• lamortenera / bamsignals
  R package to quickly obtain count vectors from indexed bam files
  ☆15Updated 3 years ago
• karel-brinda / samsift
  SAMsift: advanced filtering and tagging of SAM/BAM alignments using Python expressions.
  ☆23Updated 7 years ago
• seandavi / SRAdbV2
  R Interface to the NCBI SRA metadata
  ☆23Updated 6 years ago
• paudano / kestrel
  Mapping-free variant caller for short-read Illumina data
  ☆19Updated 5 years ago
• bede / kindel
  Indel-aware consensus for aligned BAM
  ☆21Updated last month
• scwatts / genome_painter
  Paint genomes with taxa-specific k-mer probabilities
  ☆15Updated 3 years ago
• camillescott / shmlast
  blast, shmlast
  ☆22Updated 4 years ago
• COMBINE-lab / RapClust
  Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes
  ☆31Updated 10 months ago
• tseemann / homebrew-bioinformatics-linux
  Homebrew formulae for bioinformatics software only available for Linux
  ☆27Updated 5 years ago
• kdm9 / axe
  Rapid competitive read demulitplexer. Made with tries.
  ☆23Updated last year
• jmonlong / sveval
  Functions to compare a SV call sets against a truth set.
  ☆29Updated last year
• DecodeGenetics / popvcf
  Lossless VCF compression
  ☆18Updated 3 years ago
• AgResearch / KGD
  Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment
  ☆21Updated last month
• ssadedin / ximmer
  Ximmer is a system for CNV calling on exome and targeted genomic sequencing
  ☆19Updated 2 months ago
• xa6xa6 / metaOthello
  ☆16Updated 7 years ago
• StoreyLab / bnpsd
  R package to model and simulate admixed populations
  ☆8Updated last year
• sanger-pathogens / panito
  Calculate genome wide average nucleotide identity (gwANI) for a multiFASTA alignment
  ☆16Updated 6 years ago
• EGTortuero / viga
  De novo VIral Genome Annotator
  ☆21Updated 7 months ago
• jengelmann / FastqPuri
  fastq quality assessment and filtering tool
  ☆18Updated 2 years ago
• ruolin / strawberry
  A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)
  ☆23Updated 4 years ago