Analysis framework for morphological profiling data
☆13Oct 22, 2026Updated this week
Alternatives and similar repositories for mantispy
Users that are interested in mantispy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Links between modalities in mudata☆17Oct 16, 2026Updated last week
- A toolkit to test, validate, and improve agentic skills.☆18Updated this week
- A library for interfacing with SpatialData stores in TS/JS☆11Updated this week
- AnnNet (Annotated Network) is a unified, high-expressivity graph platform designed to bring the convenience of AnnData-style annotated co…☆25Oct 11, 2026Updated last week
- ☆20Sep 17, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Dataloader for common proteomics search engine outputs into AnnData format☆14Mar 25, 2026Updated 6 months ago
- Powerful and lightweight package to identify tissue compartments in spatial transcriptomics datasets.☆22Jun 9, 2025Updated last year
- Single-cell morphological analysis☆16Apr 23, 2026Updated 6 months ago
- Facilitating the use of Deep Visual Proteomics☆22Sep 16, 2026Updated last month
- Download and Convert METASPACE datasets to common formats such as AnnData or SpatialData☆16Feb 27, 2026Updated 7 months ago
- zod schemas for ome-ngff☆11Nov 7, 2025Updated 11 months ago
- Pareto Task Inference in Python☆23Updated this week
- A modern Python library for converting Mass Spectrometry Imaging (MSI) data into standardized SpatialData/Zarr format, enabling seamless …☆25Updated this week
- An AnnData-based framework for integrated proteomics analysis☆30Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Build contrasts for models defined with formulaic☆13Oct 12, 2026Updated last week
- ☆31Updated this week
- Configure Vitessce using existing Scverse plotting APIs☆25Aug 7, 2026Updated 2 months ago
- Agentic plugins to annotate SDRF using Claude; Codex; Cursor; Gemini☆19Updated this week
- Work with trained factor models in Python☆41Oct 22, 2024Updated 2 years ago
- Spatialproteomics is a light weight wrapper around xarray with the intention to facilitate the data exploration and analysis of highly mu…☆84Updated this week
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆14Sep 29, 2026Updated 3 weeks ago
- A datastructure for EHR data☆15Updated this week
- Package for the analysis of Transcripts outside segmented cells in ST data☆32Updated this week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- A GPU-accelerated web application for visualization, annotation and sharing of spatial biology data☆14Oct 17, 2026Updated last week
- ☆18Oct 15, 2026Updated last week
- Slides and Notebooks for scverse 2024☆16Sep 24, 2024Updated 2 years ago
- A Python package for unsupervised analysis of spatial (prote)omics data.☆19Jul 23, 2026Updated 3 months ago
- Interactive and integrated analysis of multiplexed tissue microarrays☆15Updated this week
- Sample representation benchmark for single-cell data☆15Jun 12, 2026Updated 4 months ago
- ☆23Oct 13, 2026Updated last week
- Search- and quantification-engine agnostic biological interpretation of proteomics data☆42Updated this week
- Single-cell spatial omics analysis that makes you happy!☆78Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A user-friendly library that brings familiar DataFrame-style operations to AnnData objects with a simple and expressive API.☆18Aug 24, 2026Updated 2 months ago
- A performant scientific image visualization system.☆36Aug 5, 2026Updated 2 months ago
- Python API and Jupyter widget for Vitessce☆67Sep 22, 2026Updated last month
- GraphCompass: Graph Comparison Tools for Differential Analyses in Spatial Systems☆39Jul 11, 2025Updated last year
- Scalable framework for integrating single-cell omics with genetic data using AnnData.☆25Updated this week
- OMERO.web plugin for the Vitessce multimodal data viewer.☆14Jul 29, 2026Updated 2 months ago
- Multimodal Data (.h5mu) implementation for Python☆134Updated this week