reactome / reactome2py
python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.
☆28Updated last year
Alternatives and similar repositories for reactome2py:
Users that are interested in reactome2py are comparing it to the libraries listed below
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆21Updated last month
- Library of Integrated Cellular Signatures L1000☆31Updated 2 years ago
- Comprehensive Python client for the Uniprot REST API☆46Updated 6 months ago
- A Python package for mapping sequence aligned data onto protein structures☆34Updated 3 years ago
- Python package and command line tool for epitope prediction☆51Updated 7 months ago
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆28Updated last year
- Methods for mapping genomic data onto 3D protein structure.☆28Updated 2 years ago
- Python Client Package for WikiPathways☆19Updated last week
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆67Updated 3 years ago
- Connect the dots in networks.☆18Updated 4 years ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- A project for exploring differentially active signaling paths related to proteomics datasets☆40Updated 4 months ago
- SPECTRA: Spectral framework for evaluation of biomedical AI models☆37Updated this week
- ☆22Updated 2 years ago
- A 3-Dimensional View of Human Metabolism and Disease☆26Updated 7 years ago
- Proteomic Data Analysis with Python (pandas, scikit-learn, numpy, scipy)☆23Updated last year
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆65Updated last year
- A python library for creating simulated regulatory DNA sequences☆38Updated 2 years ago
- Code for the analyses in the human reference interactome paper.☆26Updated 2 years ago
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆42Updated last week
- An RNA manipulation library.☆54Updated last year
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- Community-curated tutorials and datasets for ML in proteomics☆49Updated 3 months ago
- A platform to do RNA science☆27Updated 4 years ago
- A Python package for gene network analysis☆32Updated 2 years ago
- Deep learning model to predict degron sequences☆19Updated 2 years ago
- MOLeculAR structure annoTator☆34Updated 5 months ago
- Example usage of the Benchling API: https://docs.benchling.com/☆31Updated last year
- Python library for calculting synergy of drug combinations using several drug synergy frameworks☆35Updated 4 months ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆50Updated 9 months ago