Python library for calling Cytoscape Automation via CyREST
☆87Feb 3, 2026Updated 7 months ago
Alternatives and similar repositories for py4cytoscape
Users that are interested in py4cytoscape are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Network visualization webapp.☆14Mar 6, 2023Updated 3 years ago
- Python utilities for Cytoscape and Cytoscape.js☆176Feb 21, 2022Updated 4 years ago
- Collection of scripts that include programmatic io and control of Cytoscape☆92Jun 30, 2026Updated 2 months ago
- Cytoscape org web site.☆22Jun 22, 2026Updated 2 months ago
- cy3sbml: SBML for Cytoscape 3☆15Jan 22, 2026Updated 7 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆12Aug 30, 2018Updated 8 years ago
- Core App: REST API module for Cytoscape☆31Jul 31, 2025Updated last year
- A browser-based implementation of Cytoscape for network visualization and analysis. Runs entirely in your browser with data-driven stylin…☆33Updated this week
- A Cytoscape Jupyter widget☆289Jul 6, 2026Updated 2 months ago
- [source] CELLO - Cancer EvoLution toolbox for LOngitudinal data☆17Aug 24, 2020Updated 6 years ago
- Cytoscape.js API support in JS, Python, and R Jupyter kernels☆10Nov 11, 2017Updated 8 years ago
- Cytoscape 3 API bundles.☆26Aug 15, 2026Updated 3 weeks ago
- A set of Shiny apps to provide interactive enrichment analysis and exploration of results.☆31Aug 15, 2026Updated 3 weeks ago
- About Workflow related meetup☆14Dec 4, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Absolute quantification package based on quantms.io☆16Sep 25, 2025Updated 11 months ago
- Cytoscape 3 implementation bundles.☆43Aug 18, 2026Updated 3 weeks ago
- New version of RCy3, redesigned and collaboratively maintained by Cytoscape developer community☆60Dec 3, 2025Updated 9 months ago
- GitHub pages for GPML-Repo☆12Updated this week
- Cytoscape interface to STRING and STITCH☆11May 9, 2025Updated last year
- CAISC (Clonal Architecture with Integrating SNV and CNV): a software to integrate copy number variation and single nucleotide mutations f…☆14Jul 19, 2021Updated 5 years ago
- MOCCASIN translates basic ODE-based MATLAB models of biological processes into SBML format.☆13Aug 21, 2024Updated 2 years ago
- Encoding Dynamic Flux Balance Analysis in SBML☆13Sep 16, 2020Updated 5 years ago
- Jupyter widget for the dynamic and static visualizations of systems biology models written in PySB, BNGL, and SBML☆28Mar 13, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)☆30Jul 26, 2015Updated 11 years ago
- The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a network.☆37Oct 7, 2024Updated last year
- Python library for SBGN☆12Updated this week
- CGM 主站☆11Jun 8, 2026Updated 3 months ago
- Ethnicity Annotation from Whole-Exome and Targeted Sequencing Data☆20Mar 18, 2023Updated 3 years ago
- pathway and network analysis for metabolomics☆44Dec 8, 2025Updated 8 months ago
- A Cytoscape.js extension for the hierarchical clustering algorithm☆10Jul 26, 2017Updated 9 years ago
- metabolomics/lipidomics data processing☆10Feb 17, 2021Updated 5 years ago
- ☆34Jun 12, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆12Feb 5, 2024Updated 2 years ago
- SODECL is a library of ordinary differential equation (ODE) and stochastic differential equation (SDE) solvers in OpenCL.☆11Jul 4, 2020Updated 6 years ago
- FragalyseQt - free, open-source and cross-platform tool for DNA fragment analysis data handling.☆26Aug 28, 2026Updated last week
- ☆11Aug 19, 2026Updated 2 weeks ago
- Python package to perform normalization and variance-stabilization of single-cell data☆28Jul 17, 2025Updated last year
- Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)☆16Apr 13, 2026Updated 4 months ago
- PathIntegrate Python package for pathway-based multi-omics data integration☆19Nov 9, 2024Updated last year