klavinslab / coralLinks
Coral, a library and framework for specifying synthetic biology design processes.
β34Updated 3 years ago
Alternatives and similar repositories for coral
Users that are interested in coral are comparing it to the libraries listed below
Sorting:
- A python wrapper for the benchling apiβ50Updated 5 years ago
- π¨ Python library to plot multi-part genetic constructsβ25Updated 9 months ago
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assembliesβ64Updated 8 months ago
- A route planner for DNA assemblyβ36Updated 8 months ago
- πΊ Plot DNA digestion band patterns with Pythonβ20Updated 8 months ago
- A COBRApy extension for genome-scale models of metabolism and expression (ME-models)β35Updated 7 years ago
- Curation and analysis of metabolic modelsβ36Updated 2 years ago
- Enzyme-constrained genome-scale models in pythonβ30Updated 2 years ago
- Efficiently keep track of changes to genomesβ38Updated last year
- Read DNA sequences from colourful Microsoft Word documentsβ34Updated 8 months ago
- COBRAdb loads genome-scale metabolic models and genome annotations into a relational database. It already powers BiGG Models, and it is aβ¦β20Updated 6 years ago
- SWIG-Python wrappers implementing SBOL 2.2β25Updated 4 years ago
- Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.β33Updated 9 months ago
- β23Updated 5 years ago
- π€ Python biolab automation library: parsers, report generators, picklist simulators, and moreβ46Updated 7 months ago
- repository-based plasmid designβ29Updated 3 years ago
- Easily download genomes and build BLAST/Bowtie indexes in Pythonβ22Updated 3 years ago
- The Ribosome Binding Site (RBS) Calculator can predict the translation initiation rate of a protein coding sequence in bacteria and desigβ¦β60Updated 10 years ago
- Find common blocks and differences between DNA sequencesβ42Updated 2 months ago
- Codon usage tables in code-friendly format + Python bindingsβ42Updated 8 months ago
- Web based Registry platform for managing synthetic biological partsβ42Updated last year
- The BiGG Models website serverβ88Updated 6 years ago
- π« Computer-aided DNA assembly validation and identification from restriction digests.β15Updated 7 months ago
- An amino acid sequence annotatorβ17Updated 8 months ago
- A tool for researchers working in synthetic biology and virology to design robotic wet lab protocols using a visual UI without coding.β32Updated 7 years ago
- Nanopore Plasmid Sequencingβ34Updated 2 years ago
- Web application enabling users and software to browse, upload, and share synthetic biology designsβ79Updated last week
- cameo - computer aided metabolic engineering & optimizationβ122Updated 3 years ago
- Code for DNA plasmid editing.β43Updated 7 years ago
- A flexible tool for defining the contents of 96 well plates.β51Updated last year