jcg / d-tailorLinks
☆14Updated 7 years ago
Alternatives and similar repositories for d-tailor
Users that are interested in d-tailor are comparing it to the libraries listed below
Sorting:
- Find common blocks and differences between DNA sequences☆42Updated 2 months ago
- The tRNA adaptation index☆19Updated 8 months ago
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- Parse GFF3 into Pandas dataframes☆30Updated last year
- Python bindings for the TaxonKit library☆41Updated last month
- Multiple sequence alignment visualizer☆31Updated 2 years ago
- A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations☆13Updated 2 years ago
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆27Updated 2 years ago
- Just a collection of (often poor) scripts to do various bits of bioinformatics stuff I find myself needing to do.☆63Updated 5 years ago
- Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. Now with SIMD!☆27Updated last month
- Predicting biosynthetic gene clusters in genomes☆42Updated 12 years ago
- Protein Sequence Annotation with Language Models☆25Updated this week
- An amino acid sequence annotator☆17Updated 7 months ago
- A genome browser in your Jupyter notebook☆31Updated 7 months ago
- Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments.☆37Updated last month
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- ☆23Updated 5 years ago
- Metagenomic search for novel CRISPR-transposons☆12Updated 4 years ago
- Bacterial Annotation by Learned Representation of Genes☆58Updated 4 years ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆35Updated last year
- Software for predicting translation initiation rates in bacteria☆30Updated 5 months ago
- Clustering the NCBI nr database with mmseq2 (90% length, 90% identity). Inspired by the NCBI's experimental ClusteredNR database.☆23Updated last month
- Taxon Information Query - fast, offline querying of NCBI Taxonomy and related data☆60Updated last year
- ☆10Updated 6 years ago
- Deep learning embedding for nucleotide sequences☆19Updated 9 months ago
- ☆31Updated 4 years ago
- Nanopore UMI-linked consensus sequencing☆16Updated 4 years ago
- Python package to plot sequence logos☆29Updated 2 years ago
- A high-fidelity E. coli RNA-seq compendium☆33Updated 4 years ago
- draw sequence logos tailored to deep mutational scanning (DMS) data☆12Updated 2 years ago