G33KB00K3 - fun to read & fun to write -- π€ eXtreme eXtendable note taking system for nerds/geeks (including scientists!) docs: http://geekbook.rtfd.io = beautiful html generator of your markdown-based notes
β46Apr 9, 2026Updated 4 months ago
Alternatives and similar repositories for geekbook
Users that are interested in geekbook are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- π§rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs β¦β185Apr 8, 2026Updated 4 months ago
- Curated structures submitted to the RNA-Puzzles experiment. Download as a zip file https://github.com/mmagnus/RNA-Puzzles-submission/archβ¦β11Apr 6, 2023Updated 3 years ago
- RNA 3D structure prediction using multiple sequence alignment information docs @ http://EvoClustRNA.rtfd.ioβ14Nov 3, 2022Updated 3 years ago
- pdb-mode is an emacs-lisp minor mode for Emacs to perform a number of useful editing functions on Protein DataBank (PDB) formatted files.β¦β13Sep 15, 2022Updated 3 years ago
- see what you are working on with XBar, Conky ;-) [if using emacs/orgmode/clocking] + alternativesβ12Nov 15, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- an Emacs extension to send a text to/from Grammarlyβ115Apr 8, 2021Updated 5 years ago
- awesome tools for RNAβ17Nov 15, 2022Updated 3 years ago
- State of the art software for RNA sequence design. The first to solve the Eterna benchmark!β16Jul 17, 2024Updated 2 years ago
- Base pair-augmented SE(3)-flow matching for conditional RNA 3D structure generationβ23Updated this week
- π Modified version of the Calibre plugin for Pocket. Now, you get your articles organized by your Pocket tags, and more!β281Jul 9, 2025Updated last year
- Python implementation of the FR3D software for searching and annotating RNA 3D structuresβ25Updated this week
- Analyse Nucleic Acids Structure and Simulations with baRNAbaβ59Mar 20, 2024Updated 2 years ago
- β26May 22, 2026Updated 2 months ago
- rnalib: a python-based transcriptomics libraryβ14Jul 27, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- RNA secondary structure prediction toolβ20Jul 31, 2026Updated last week
- wwPDB PDBx/mmCIF Dictionaryβ10Jul 24, 2026Updated 2 weeks ago
- Source code for 'Migrating to Azure' by Josh Garverickβ13Jul 25, 2023Updated 3 years ago
- my emacs configβ11May 2, 2024Updated 2 years ago
- A dataset for training and benchmarking deep learning models for RNA structure predictionβ68May 8, 2026Updated 3 months ago
- Deep learning based prediction of pi-helices in protein sequencesβ11Mar 24, 2023Updated 3 years ago
- Seamless integration between Darkman and Emacs using the D-Bus protocol.β14Nov 12, 2024Updated last year
- bioinfo workflow based on snakemakeβ15Feb 22, 2024Updated 2 years ago
- Port of jumplist in vimβ15Nov 20, 2015Updated 10 years ago
- Deploy on Railway without the complexity - Free Credits Offer β’ AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A unified and modular interface to homology modelling softwareβ12Sep 27, 2023Updated 2 years ago
- Reproducible Emacs configuration for fast navigation, code exploration, and architecture workflows β structured to minimise state, reduceβ¦β14Jul 31, 2026Updated last week
- StructureFold2β12Jun 25, 2022Updated 4 years ago
- Emacs interface to multitran.comβ18Feb 6, 2024Updated 2 years ago
- Knowledge management system based on graph data structureβ13Jul 2, 2024Updated 2 years ago
- Fast and exact ILP-based solvers for the Minimum Flow Decomposition problem, and variants of it.β14Dec 4, 2025Updated 8 months ago
- Flycheck integration for the vale natural language linterβ68Sep 29, 2022Updated 3 years ago
- The Protein Feature View - a SVG library for visualising protein annotationsβ13Sep 18, 2017Updated 8 years ago
- Local Abbrev Manager for Emacsβ17May 7, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform β’ AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- C implementation of the Landau-Vishkin algorithmβ36Apr 8, 2022Updated 4 years ago
- R package for visualization and exploratory analysis of Oxford Nanopore direct RNA seq based polyA predictionsβ13Jun 25, 2024Updated 2 years ago
- β22Jul 27, 2026Updated 2 weeks ago
- β22Nov 4, 2022Updated 3 years ago
- Dynamic programming for aa-to-nt alignment with affine gap, splicing and frameshiftβ19Sep 30, 2024Updated last year
- A package for programmatically creating jump shortcuts in org-mode.β27Feb 9, 2025Updated last year
- to assess structural quality of RNA using 3D CNNβ15Aug 17, 2018Updated 7 years ago