RNA Structural Bioinformatics Crash Course & Data Science in Python
☆14Oct 19, 2022Updated 4 years ago
Alternatives and similar repositories for RNA-Structural-Bioinformatics-Crash-Course
Users that are interested in RNA-Structural-Bioinformatics-Crash-Course are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Curated structures submitted to the RNA-Puzzles experiment. Download as a zip file https://github.com/mmagnus/RNA-Puzzles-submission/arch…☆11Apr 6, 2023Updated 3 years ago
- ABC of chemoinformatics☆20Aug 3, 2018Updated 8 years ago
- RNA 3D structure prediction using multiple sequence alignment information docs @ http://EvoClustRNA.rtfd.io☆14Nov 3, 2022Updated 3 years ago
- awesome tools for RNA☆17Nov 15, 2022Updated 3 years ago
- see what you are working on with XBar, Conky ;-) [if using emacs/orgmode/clocking] + alternatives☆12Nov 15, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- pdb-mode is an emacs-lisp minor mode for Emacs to perform a number of useful editing functions on Protein DataBank (PDB) formatted files.…☆13Sep 15, 2022Updated 4 years ago
- 🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …☆185Oct 17, 2026Updated 2 weeks ago
- Analyse Nucleic Acids Structure and Simulations with baRNAba☆59Mar 20, 2024Updated 2 years ago
- G33KB00K3 - fun to read & fun to write -- 🤓 eXtreme eXtendable note taking system for nerds/geeks (including scientists!) docs: http://g…☆46Aug 18, 2026Updated 2 months ago
- Python code to run Supervised Molecular Dynamics (SuMD) simulations☆16Apr 24, 2024Updated 2 years ago
- Direct coupling analysis software for protein and RNA sequences☆61Jul 21, 2025Updated last year
- Script to facilitate the making of horizontal scripts☆17May 25, 2024Updated 2 years ago
- to assess structural quality of RNA using 3D CNN☆15Aug 17, 2018Updated 8 years ago
- Centroid RNA package☆20Oct 12, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Gromacs_py is a python library allowing a simplified use of the gromacs MD simulation software. Gromacs_py can build topologie based on a…☆53Jul 5, 2022Updated 4 years ago
- Base pair-augmented SE(3)-flow matching for conditional RNA 3D structure generation☆32Aug 8, 2026Updated 2 months ago
- QRNAS: Quick Refinement of Nucleic Acid Structures☆18Apr 30, 2025Updated last year
- ☆10Apr 24, 2025Updated last year
- Visualization, comparison, and analysis of RNA secondary structures via a cross-platform GUI☆18May 19, 2025Updated last year
- A Python application to find and classify tetrads and quadruplexes in DNA/RNA 3D structures☆20Oct 23, 2026Updated last week
- Basic RNA 3D structure comparison metrics in RNA-Puzzles, including INF, DI and RMSD. It also includes `RNA_normalizer` tool in pdb_utils…☆27Dec 3, 2024Updated last year
- OPUS-Rota4: A Gradient-Based Protein Side-Chain Modeling Framework Assisted by Deep Learning-Based Predictors☆10Apr 14, 2022Updated 4 years ago
- Machine learning utility functions and classes.☆11Jan 14, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- This is a repo used for CTBP tech talks☆13Nov 12, 2025Updated 11 months ago
- wwPDB PDBx/mmCIF Dictionary☆10Sep 5, 2026Updated last month
- The bioplib library☆11Jul 25, 2023Updated 3 years ago
- Software for detecting non-covalent interactions formed within complexes of nucleic acids with ligands.☆35Jun 3, 2022Updated 4 years ago
- This repository provides an implementation of the DTi2Vec tool, to identify Drug-Target interaction using network embedding and ensemble …☆12Sep 28, 2021Updated 5 years ago
- A Python library containing RNA-related bioinformatics functions and classes.☆24Oct 22, 2026Updated last week
- Robust RNA structure refinement by a nucleobase-centric sampling algorithm coupled with a backbone rotameric and quantum-mechanical-energ…☆20Apr 3, 2021Updated 5 years ago
- A platform to do RNA science☆28Mar 7, 2021Updated 5 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- General purpose repository for all things factorio☆16Updated this week
- A bioinformatics toolset for multiomic analysis☆22Aug 17, 2026Updated 2 months ago
- With RNArtist, you construct a collection of RNA structures that can be gathered into RNA families, projects,...☆177Nov 24, 2023Updated 2 years ago
- CryoREAD: a computational tool using deep learning to automatically build full DNA/RNA atomic structure from cryo-EM map.☆32Oct 14, 2024Updated 2 years ago
- ☆14Dec 18, 2019Updated 6 years ago
- Deep learning based prediction of pi-helices in protein sequences☆11Mar 24, 2023Updated 3 years ago
- ☆35Nov 7, 2022Updated 3 years ago