A platform to do RNA science
☆27Mar 7, 2021Updated 5 years ago
Alternatives and similar repositories for RNA-Science-Toolbox
Users that are interested in RNA-Science-Toolbox are comparing it to the libraries listed below
Sorting:
- ☆17Jan 29, 2026Updated last month
- Visualization, comparison, and analysis of RNA secondary structures via a cross-platform GUI☆17May 19, 2025Updated 10 months ago
- Centroid RNA package☆20Oct 12, 2020Updated 5 years ago
- Template-based RNA secondary structure visualization☆28Nov 20, 2024Updated last year
- Visualize global properties of large RNAs using GraphViz force-directed layout.☆23Sep 7, 2023Updated 2 years ago
- Semiautomated layout of RNA tertiary structure diagrams☆15Feb 26, 2025Updated last year
- atomes: codeblocks dev files☆15Mar 14, 2026Updated last week
- Very flexible tools for plotting and analyzing all kinds of RNA structure data☆16Feb 6, 2026Updated last month
- Calculate the RMSD between two protein structures☆12Jun 29, 2022Updated 3 years ago
- An RNA manipulation library.☆56Feb 16, 2024Updated 2 years ago
- Code to accompany "Practical Cheminformatics With Open Source Software"☆16Feb 24, 2022Updated 4 years ago
- Target prediction☆13May 8, 2020Updated 5 years ago
- ☆11Apr 22, 2024Updated last year
- ChEMBL Similarity Search☆18Nov 28, 2020Updated 5 years ago
- Create force-directed graphs of RNA secondary structures.☆110Jun 6, 2020Updated 5 years ago
- ☆11Jan 21, 2019Updated 7 years ago
- fragbuilder is a tool to create, setup and analyze QM calculations on peptides.☆15Oct 31, 2014Updated 11 years ago
- To run metadynamics simulations using openMM (based on Peter Eastman's script)☆13Mar 18, 2019Updated 7 years ago
- RNA secondary structure prediction tool☆20Feb 18, 2026Updated last month
- ☆32Apr 18, 2025Updated 11 months ago
- awesome tools for RNA☆17Nov 15, 2022Updated 3 years ago
- Scripts for assisting in modeling quantitative structure activity relationships from 2D chemical data☆62Feb 23, 2022Updated 4 years ago
- Rapid mining of RNA structure motifs from profiling data.☆14Oct 20, 2021Updated 4 years ago
- A collections of scripts for working molecular dynamics simulations☆45Feb 6, 2026Updated last month
- Python implementation of the FR3D software for searching and annotating RNA 3D structures☆22Mar 8, 2026Updated last week
- With RNArtist, you construct a collection of RNA structures that can be gathered into RNA families, projects,...☆177Nov 24, 2023Updated 2 years ago
- Direct coupling analysis software for protein and RNA sequences☆60Jul 21, 2025Updated 8 months ago
- RNA secondary structure/sequence profiles for homology search and alignment☆128Mar 13, 2026Updated last week
- RNA Structural Bioinformatics Crash Course & Data Science in Python☆14Oct 19, 2022Updated 3 years ago
- Simulation code for the prediction of RNA structures.☆13Jan 21, 2025Updated last year
- Data set of protein-ligand complexes with reliable experimental structures and affinities☆44Oct 2, 2025Updated 5 months ago
- A Python application to find and classify tetrads and quadruplexes in DNA/RNA 3D structures☆19Updated this week
- Elastic Network Contact Model (coarse-grained Normal Mode Analysis software)☆14Jul 29, 2017Updated 8 years ago
- RNAdvisor is a docker-based wrapper that integrates other metrics and scoring functions for RNA 3D structure evaluation.☆16May 6, 2025Updated 10 months ago
- RNA 3D structure prediction using multiple sequence alignment information docs @ http://EvoClustRNA.rtfd.io☆14Nov 3, 2022Updated 3 years ago
- APBS & PDB2PQR - software for biomolecular electrostatics and solvation☆31Jun 11, 2022Updated 3 years ago
- SMARTS: 'regular expressions' for chemical structures☆21Jun 21, 2018Updated 7 years ago
- ☆17Jul 21, 2023Updated 2 years ago
- to assess structural quality of RNA using 3D CNN☆13Aug 17, 2018Updated 7 years ago