Alternatives and similar repositories for RNA-Science-Toolbox

Users that are interested in RNA-Science-Toolbox are comparing it to the libraries listed below

• dmnfarrell / epitopepredict
  Python package and command line tool for epitope prediction
  ☆52Updated last year
• hgbrian / biocolabs
  a collection of colabs useful for molecular biology
  ☆31Updated last year
• andrewguy / biostructmap
  A Python package for mapping sequence aligned data onto protein structures
  ☆36Updated 4 years ago
• graik / biskit
  A Python platform for Structural Bioinformatics
  ☆58Updated 9 months ago
• lasersonlab / pepsyn
  Peptide library design
  ☆23Updated 5 years ago
• sbl-sdsc / mmtf-genomics
  Methods for mapping genomic data onto 3D protein structure.
  ☆28Updated 3 years ago
• TurtleTools / caretta
  A software-suite to perform multiple protein structure alignment and structure feature extraction.
  ☆31Updated 2 years ago
• biomadeira / pycoevol
  A Python workflow to study protein-protein coevolution and interaction
  ☆21Updated 8 years ago
• brineylab / abstar
  VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.
  ☆44Updated 2 weeks ago
• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆56Updated 3 years ago
• ViennaRNA / RNAsketch
  Python wrapper to design RNA molecules using RNAblueprint, RNARedPrint and for energy evaluations ViennaRNA, Hotknots, pKiss and Nupack.
  ☆21Updated 7 years ago
• cusbg / MolArt
  MOLeculAR structure annoTator
  ☆33Updated last year
• wallnerlab / ProQDock
  ProQDock is a Protein-Protein docking scoring program that uses high level coordinate driven features compiled and trained by a Support V…
  ☆11Updated 4 years ago
• esbgkannan / chumby
  A package for making tree-based visualizations for embedding vectors
  ☆10Updated 2 years ago
• jurgjn / af-protein-universe
  Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…
  ☆27Updated 2 years ago
• psipred / psipred
  PSIPRED Protein Secondary Structure Predictor
  ☆58Updated 5 months ago
• i2bc / SCAN_IDR
  ☆13Updated last year
• chembl / tractability_pipeline_v2
  Pipeline for assessing the tractability of potential targets (starting from Gene IDs)
  ☆29Updated 10 months ago
• mgalardini / pdb2uniprot
  Convert PDB residues to their Uniprot equivalents
  ☆17Updated 5 years ago
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆65Updated 5 months ago
• Faezov / PDBrenum
  ☆30Updated 7 months ago
• normandavey / AlphaFold2-IDR-complex-prediction
  ☆39Updated 4 years ago
• graph-part / graph-part
  GraphPart, a data partitioning method for ML on biological sequences
  ☆32Updated 2 years ago
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆70Updated 8 years ago
• drgoulet / Codon-optimization
  Use machine learning to design codon-optimized DNA sequences for increased protein expression.
  ☆15Updated 3 years ago
• kWeissenow / MutAmore
  Rendering protein mutation movies from predicted 3D structures
  ☆20Updated 2 years ago
• ThomasCMcLean / LazyAF
  Code for LazyAF pipeline
  ☆21Updated last year
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆60Updated 8 months ago
• r2dt-bio / R2DT
  Visualise RNA secondary structure in consistent, reproducible and recognisable layouts
  ☆77Updated last month
• Rostlab / bindPredict
  Prediction of binding residues for metal ions, nucleic acids, and small molecules.
  ☆34Updated 3 months ago