☆12Sep 7, 2019Updated 7 years ago
Alternatives and similar repositories for remuval
Users that are interested in remuval are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆14Jan 31, 2020Updated 6 years ago
- Minhash Index Extended to Knead Kmer Intersection☆11Mar 18, 2020Updated 6 years ago
- Pan-genome Seed Index☆20Jul 3, 2026Updated 3 months ago
- ☆19Aug 18, 2020Updated 6 years ago
- Fast and compact locality-preserving minimal perfect hashing for k-mer sets.☆44Nov 18, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A rust wrapper for the spoa C++ partial order alignment library☆10Jun 11, 2025Updated last year
- ☆18Apr 10, 2015Updated 11 years ago
- De Bruijn graph representation in low memory☆36Jul 6, 2024Updated 2 years ago
- ☆15Apr 6, 2016Updated 10 years ago
- Singular Genomics Demultiplexing Tool☆16Mar 5, 2024Updated 2 years ago
- ProphAsm – a rapid computation of simplitigs directly from k-mer sets☆25Feb 17, 2023Updated 3 years ago
- A slack bot solution for enterprise☆14Sep 27, 2023Updated 3 years ago
- Layout module for raw de novo genome assembly of long uncorrected reads.☆21Feb 2, 2021Updated 5 years ago
- Removing PCR duplicates for sequencing reads.☆14Sep 8, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆19Nov 21, 2024Updated last year
- An efficient index for the colored, compacted, de Bruijn graph☆113Jun 19, 2026Updated 4 months ago
- find likely coding segments in DNA using composition-normalised hexamer tables☆18Oct 18, 2024Updated 2 years ago
- Pairwise nucleotide alignment benchmark of Rust bindings☆32Jul 27, 2023Updated 3 years ago
- A more gdb-like debugger for nodejs. In style of the trepan family of debuggers.☆16Jan 25, 2022Updated 4 years ago
- Very large scale k-mer counting and analysis on Apache Spark.☆19Sep 30, 2026Updated last month
- Efficient C functions to compute the summary statistics (flagstats) for sequencing read sets.☆16Aug 1, 2026Updated 2 months ago
- BLEND is a mechanism that can efficiently find fuzzy seed matches between sequences to significantly improve the performance and accuracy…☆47May 10, 2023Updated 3 years ago
- GBZ file format for pangenome graphs☆47Sep 14, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Compressed, associative, and exact hash table for k-mers☆11Oct 15, 2026Updated 2 weeks ago
- Parallel Sequence to Graph Alignment☆36Nov 26, 2022Updated 3 years ago
- ☆14Oct 14, 2020Updated 6 years ago
- Iterate k-min-mers from a DNA sequence in Rust☆13Apr 8, 2024Updated 2 years ago
- a Sequencing Quality Assessment Tool☆16Jul 28, 2022Updated 4 years ago
- Compressive Read-mapping Accelerator☆14Sep 7, 2016Updated 10 years ago
- Rust library for processing sequencing reads.☆25Sep 2, 2024Updated 2 years ago
- Next Index to Query Kmer Intersection☆17Feb 1, 2023Updated 3 years ago
- BagMinHash - Minwise Hashing Algorithm for Weighted Sets☆26Aug 26, 2020Updated 6 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- compacted de Bruijn graph construction in low memory☆102Nov 4, 2025Updated 11 months ago
- Space-efficient pseudoalignment with a colored de Bruijn graph☆59Mar 13, 2025Updated last year
- Code for the paper Aligning Distant Sequences to Graphs using Long Seed Sketches.☆13Nov 1, 2022Updated 3 years ago
- De Bruijn graphs in Rust☆72Jul 22, 2024Updated 2 years ago
- VariantStore: A Large-Scale Genomic Variant Search Index☆40Jul 9, 2021Updated 5 years ago
- a toolset for efficient analysis of 10X Genomics linked read data sets, in particular for de novo assembly☆15Nov 27, 2019Updated 6 years ago
- vector illustrations of BWT based searching on small strings☆16Apr 29, 2019Updated 7 years ago