sambitmishra0628 / siRNA_activity_predictionView external linksLinks
Predicting siRNA activity with machine learning
☆24Aug 27, 2019Updated 6 years ago
Alternatives and similar repositories for siRNA_activity_prediction
Users that are interested in siRNA_activity_prediction are comparing it to the libraries listed below
Sorting:
- python script that picks suitable targets for siRNA with off-target optimization☆17Oct 23, 2021Updated 4 years ago
- Collection of tools to retrieve siRNA (small interfering RNA) candidate sequences targeting your gene of interest from popular siRNA desi…☆16Nov 22, 2022Updated 3 years ago
- Visual exploratory analysis of gene expression data☆45Nov 11, 2025Updated 3 months ago
- ☆10Jan 26, 2026Updated 2 weeks ago
- ☆47Oct 31, 2025Updated 3 months ago
- ☆14Mar 22, 2018Updated 7 years ago
- Gromacs molecular dynamics simulation analysis scripts☆10Apr 5, 2022Updated 3 years ago
- HIVID2 is a tool for detecting virus integration events in the host genome.☆12Oct 1, 2023Updated 2 years ago
- ☆10Nov 23, 2018Updated 7 years ago
- Detecting recombination of viral lineages☆11Dec 23, 2025Updated last month
- EXPRORER: Rational cosolvents set construction method for cosolvent molecular dynamics (CMD) with large-scale computation☆11Jul 28, 2022Updated 3 years ago
- Compare microbial co-occurrence networks based on the trans_network class of microeco package☆12Jan 6, 2026Updated last month
- Code used in Tiukhova et al. (2022). Influencer Detection with Dynamic Graph Neural Networks. TGL@Neurips 2022.☆10Feb 9, 2023Updated 3 years ago
- Microbial marker identification from cross-cohort datasets☆14May 15, 2024Updated last year
- The R/Python scripts for the analysis of single-cell RNA-seq data from COVID-19 patients☆10Dec 16, 2020Updated 5 years ago
- This repository contains original codes for major analyses in the manuscript 'The multi-kingdom airway microbiome mediates the interactio…☆12Apr 27, 2024Updated last year
- HemoPI2: Prediction of hemolytic activity of peptides against mammalian RBCs☆13Feb 10, 2025Updated last year
- Deep Generative Models: Diffusion Models for Molecule Generation☆10Jun 17, 2024Updated last year
- ☆16Dec 2, 2025Updated 2 months ago
- ☆11Jan 21, 2019Updated 7 years ago
- Datamonkey - Run state-of-the-art statistical models through the comfort of your browser☆10Updated this week
- Tutorials on doing AMBER based Metadynamics and Gaussian Accelerated MD (GaMD)☆11Dec 1, 2025Updated 2 months ago
- Simple Jupyter chat UI for LangChain☆11Jul 3, 2024Updated last year
- Collisional cross-section prediction for modified and multiconformational peptides☆13Jan 19, 2026Updated 3 weeks ago
- Cloud-based molecular docking for everyone☆12Jul 1, 2024Updated last year
- Protocols for running MD simulations in Gromacs☆10Jun 18, 2024Updated last year
- Reference-free quality assessment for Hi-C sequencing data☆13Apr 30, 2024Updated last year
- Obsolete!! Begin to turn to PrimerServer2☆10Jul 22, 2019Updated 6 years ago
- [AAAI 2023] Scalable Attributed-Graph Subspace Clustering☆12Jul 16, 2023Updated 2 years ago
- A unified and modular interface to homology modelling software☆12Sep 27, 2023Updated 2 years ago
- cnv-seq with custom bugfix☆10Mar 23, 2013Updated 12 years ago
- This is the official implementation of "Motif-based Graph Representation Learning with Application to Chemical Molecules".☆11Feb 10, 2023Updated 3 years ago
- workflow to analysis of whole-exome-sequencing☆12Feb 12, 2020Updated 6 years ago
- The code for running the analysis component of CSI-Microbe☆12Jan 3, 2024Updated 2 years ago
- Nextflow pipeline to convert VCF files into MAF files.☆10Dec 12, 2025Updated 2 months ago
- Therapeutic Nanobody Profiler☆16Nov 11, 2025Updated 3 months ago
- Screening Historical Events of Recombination in a Phylogeny via Ancestral Sequences☆10Sep 3, 2025Updated 5 months ago
- This repository chronicles my 100-day Python learning journey, where I'll start from the very basics and work my way up to more advanced …☆13Feb 9, 2024Updated 2 years ago
- ☆11Nov 22, 2024Updated last year