☆56Oct 31, 2025Updated 10 months ago
Alternatives and similar repositories for OligoFormer
Users that are interested in OligoFormer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Collection of tools to retrieve siRNA (small interfering RNA) candidate sequences targeting your gene of interest from popular siRNA desi…☆22Nov 22, 2022Updated 3 years ago
- ☆17Aug 17, 2025Updated last year
- ☆17Aug 17, 2025Updated last year
- python script that picks suitable targets for siRNA with off-target optimization☆16Oct 23, 2021Updated 4 years ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆16Jul 5, 2023Updated 3 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- A tool for sample swap identification in high throughput sequencing studies☆10Mar 4, 2025Updated last year
- ☆14Apr 8, 2025Updated last year
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆14Apr 23, 2024Updated 2 years ago
- ☆10Nov 6, 2023Updated 2 years ago
- Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion☆19Feb 8, 2024Updated 2 years ago
- Central repository for the VICC metakb web application☆15Updated this week
- Heuristic energy-based cyclic peptide design☆16Feb 21, 2025Updated last year
- a machine learning model to identify nucleotide features determining RNA subcellular localization☆13Mar 11, 2023Updated 3 years ago
- Repository to automatically process Fluorescence In Situ Hybridization (FISH) images using Cellpose and BIG-FISH (FISH-quant v2).☆19Dec 16, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- TPepPro: a deep learning model for predicting peptide-protein interactions☆15Jun 25, 2024Updated 2 years ago
- Nature Computational Science: RhoDesign is a structure-to-sequence model for RNA design.☆65Nov 8, 2024Updated last year
- How Will Your Tweet Be Received? Predicting theSentiment Polarity of Tweet Replies☆12Aug 29, 2021Updated 5 years ago
- Pathformer: biological pathway informed transformer model☆40Dec 27, 2023Updated 2 years ago
- Implementation of ICML23 paper "Learning Subpocket Prototypes for Generalizable Structure-based Drug Design"☆31Feb 20, 2024Updated 2 years ago
- Frankies Scalable, AI-Based Antibody Design Pipeline☆18Feb 20, 2026Updated 7 months ago
- ☆27Nov 20, 2025Updated 10 months ago
- An end-to-end linear-time algorithm for structural alignment and conserved structure prediction of RNA homologs☆13Jun 28, 2024Updated 2 years ago
- Reinforcement learning based cyclic peptide binder design☆20Jul 22, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- MXfold2: RNA secondary structure prediction using deep learning with thermodynamic integration☆163Mar 22, 2026Updated 5 months ago
- DeepSoluE☆18Sep 18, 2023Updated 3 years ago
- ☆26Dec 16, 2025Updated 9 months ago
- Nature Methods: RNA foundation model (together with RhoFold)☆388May 27, 2025Updated last year
- Orthrus is a mature RNA model for RNA property prediction. It uses a mamba encoder backbone, a variant of state-space models specifical…☆131Dec 10, 2025Updated 9 months ago
- DeepAAI☆36Dec 25, 2024Updated last year
- ☆40Jun 10, 2025Updated last year
- R code in workflow of chip-seq analysis☆11Nov 20, 2019Updated 6 years ago
- ☆47Apr 30, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- RiboNucleic Acid (RNA) Language Model☆175May 4, 2026Updated 4 months ago
- miRTrace☆13Jun 14, 2023Updated 3 years ago
- Foundation model-driven lab☆35Mar 25, 2026Updated 5 months ago
- ☆11May 22, 2024Updated 2 years ago
- Fast, gene-specific joint humanisation of antibody heavy and light chains.☆27Nov 11, 2025Updated 10 months ago
- Predicting siRNA activity with machine learning☆28Aug 27, 2019Updated 7 years ago
- ☆13Mar 28, 2025Updated last year