Arcadia-Science / ProteinCartographyLinks
A pipeline to build similarity maps of protein space
☆38Updated last week
Alternatives and similar repositories for ProteinCartography
Users that are interested in ProteinCartography are comparing it to the libraries listed below
Sorting:
- Multi-class signal peptide prediction and structure decoding model.☆95Updated 8 months ago
- snakemake pipeline for creating trees from sequence sets☆86Updated last week
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆120Updated last year
- Protein 3D structure prediction pipeline☆86Updated this week
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆153Updated 10 months ago
- Evolutionary velocity with protein language models☆94Updated last year
- Transmembrane proteins predicted through Language Model embeddings☆39Updated 2 months ago
- Multiple Protein Structure Alignment at Scale with FoldMason☆190Updated last week
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…☆55Updated 5 months ago
- A machine learning model for the prediction of optimal growth temperature of microorganisms and enzyme catalytic optima☆61Updated 5 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆75Updated 2 months ago
- ☆80Updated 2 years ago
- Genomic language model predicts protein co-regulation and function☆81Updated 6 months ago
- Comprehensive Python client for the Uniprot REST API☆50Updated 3 months ago
- UniProt Id Mapping through API☆35Updated 2 weeks ago
- MMseqs2 app to run on your workstation or servers☆97Updated 2 weeks ago
- ☆11Updated 2 years ago
- An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies☆35Updated 2 weeks ago
- Feature map and function annotation of Proteins☆33Updated last year
- Automatic oligonucleotide design for PCR-based gene synthesis☆47Updated 6 years ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- BGC Detection and Classification Using Deep Learning☆153Updated last year
- Protein structure alignment and search algorithm☆72Updated this week
- Python framework for doing ancestral sequence reconstruction☆41Updated last year
- DeepECtransformer☆28Updated last year
- Fast protein domain structure embedding+search tool☆25Updated 2 weeks ago
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆73Updated 3 weeks ago
- Neural Networks for Protein Sequence Alignment☆128Updated 10 months ago
- Deep networks for protein functional inference☆177Updated 3 months ago
- Fast protein structure searching or your money back☆114Updated this week