weizhongli / cdhit-web-serverLinks
☆20Updated 2 years ago
Alternatives and similar repositories for cdhit-web-server
Users that are interested in cdhit-web-server are comparing it to the libraries listed below
Sorting:
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- ☆51Updated this week
- https://www.nature.com/articles/s41598-020-74091-z#Tab1☆40Updated last year
- Geometric deep learning of protein–DNA binding specificity☆76Updated 4 months ago
- scripts and facilities for in-silico mutagenesis with FoldX☆57Updated 3 weeks ago
- ☆68Updated 10 months ago
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆101Updated 3 months ago
- Set of Python scripts designed to be a dependency-free cross-platform swiss army knife for PDB files.☆26Updated 3 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆56Updated 4 months ago
- A domain parser for Alphafold models☆39Updated last year
- Install alphafold on the local machine, get out of docker.☆102Updated 3 years ago
- Fast indexing and search of discontinuous motifs in protein structures☆62Updated last week
- Mutation effects predicted from sequence co-variation☆66Updated 7 years ago
- GTalign, high-performance protein structure alignment, superposition and search☆47Updated last month
- Feature map and function annotation of Proteins☆33Updated last year
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆42Updated last year
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆60Updated 4 years ago
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆73Updated 7 months ago
- Protein language model trained on coding DNA☆47Updated 9 months ago
- ColabFold protocol☆52Updated 9 months ago
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆40Updated 10 months ago
- python tools for TCR:peptide-MHC modeling and analysis☆80Updated last year
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆106Updated last year
- ☆31Updated 3 years ago
- A software package for computing features of peptides and proteins☆63Updated last year
- Direct coupling analysis software for protein and RNA sequences☆51Updated 2 weeks ago
- Physicochemical properties, indices and descriptors for amino-acid sequences.☆99Updated 2 weeks ago
- ☆43Updated 10 months ago
- ☆36Updated last month
- Neural Networks for Protein Sequence Alignment☆124Updated 8 months ago