weizhongli / cdhit-web-server

Related projects: ⓘ

• fteufel / signalp-6.0
  Multi-class signal peptide prediction and structure decoding model.
  ☆78Updated 7 months ago
• jafetgado / PyCanal
  Conservation analysis of homologous proteins with Python
  ☆9Updated 3 years ago
• idrblab / AnnoPRO
  Feature map and function annotation of Proteins
  ☆27Updated 3 months ago
• DessimozLab / fold_tree
  snakemake pipeline for creating trees from sequence sets
  ☆67Updated last week
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆44Updated 3 months ago
• ntranoslab / esm-variants
  ☆63Updated 11 months ago
• ml4bio / Dense-Homolog-Retrieval
  Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval
  ☆59Updated 2 weeks ago
• Devil625 / Codon_Optimization
  https://www.nature.com/articles/s41598-020-74091-z#Tab1
  ☆36Updated 6 months ago
• MPI-Dortmund / pymissense
  PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.
  ☆22Updated 11 months ago
• steineggerlab / foldmason
  Multiple Protein Structure Alignment at Scale with FoldMason
  ☆111Updated last week
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆49Updated last month
• dosorio / Peptides
  An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.
  ☆79Updated 7 months ago
• moshi4 / pyMSAviz
  MSA(Multiple Sequence Alignment) visualization python package for sequence analysis
  ☆78Updated this week
• phbradley / TCRdock
  python tools for TCR:peptide-MHC modeling and analysis
  ☆65Updated 5 months ago
• soedinglab / MMseqs2-App
  MMseqs2 app to run on your workstation or servers
  ☆55Updated this week
• prehensilecode / alphafold_singularity
  Singularity recipe for AlphaFold
  ☆32Updated last year
• Rostlab / ProNA2020
  ProNA2020: System predicting protein-DNA, protein-RNA and protein-protein binding sites from sequence
  ☆14Updated 4 years ago
• raghavagps / Pfeature
  A software package for computing features of peptides and proteins
  ☆53Updated 3 months ago
• amirpandi / Deep_AMP
  Generator and regressor neural networks for antimicrobial peptides
  ☆21Updated 7 months ago
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆83Updated 10 months ago
• BernhoferM / TMbed
  Transmembrane proteins predicted through Language Model embeddings
  ☆26Updated 6 months ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆71Updated 5 months ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆46Updated last month
• jcheongs / alphafold-multimer
  ☆21Updated 2 years ago
• kuixu / alphafold
  Install alphafold on the local machine, get out of docker.
  ☆97Updated 2 years ago
• Eryk96 / NetSurfP-3.0
  NetSurfP 3.0: Protein secondary structure and relative solvent accessibility prediction
  ☆16Updated last year
• Superzchen / iFeatureOmega-CLI
  iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…
  ☆25Updated last year
• iquasere / UPIMAPI
  UniProt Id Mapping through API
  ☆28Updated 2 weeks ago
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆44Updated 5 months ago
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆59Updated 7 years ago