sacdallago / biotrainerLinks
Biological prediction models made simple.
☆44Updated 2 weeks ago
Alternatives and similar repositories for biotrainer
Users that are interested in biotrainer are comparing it to the libraries listed below
Sorting:
- ☆36Updated 9 months ago
- ☆72Updated last year
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆39Updated last year
- ☆70Updated last year
- Protein language model trained on coding DNA☆51Updated last year
- ☆43Updated last year
- ☆30Updated 2 years ago
- Detection of remote homology by comparison of protein language model representations☆56Updated 10 months ago
- Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…☆37Updated 2 months ago
- Evolutionary velocity with protein language models☆94Updated 2 years ago
- ☆45Updated last month
- Fast protein structure searching or your money back☆114Updated 2 weeks ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆60Updated 6 months ago
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Updated last year
- ☆25Updated 2 years ago
- ColabFold protocol☆55Updated last year
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…☆55Updated 6 months ago
- Learning the language of protein-protein interactions☆98Updated last month
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆74Updated last month
- GraphPart, a data partitioning method for ML on biological sequences☆30Updated 2 years ago
- A tool for protein and protein complex structure prediction.☆29Updated 4 months ago
- A domain parser for Alphafold models☆41Updated last year
- Predict the structure of immune receptor proteins☆57Updated 11 months ago
- Code repository of "Deep generative design of RNA family sequences"☆38Updated last year
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆82Updated last year
- The code used to generate the results from Parkinson / Hard et al. 2022☆17Updated 4 months ago
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆62Updated last year
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆59Updated 4 years ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆71Updated 4 months ago