royerlab / napari-segment-anythingView external linksLinks
Segment Anything Model (SAM) native Qt UI
☆211Aug 29, 2024Updated last year
Alternatives and similar repositories for napari-segment-anything
Users that are interested in napari-segment-anything are comparing it to the libraries listed below
Sorting:
- Spotiflow plugin for napari☆15Feb 2, 2026Updated last week
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆45May 1, 2025Updated 9 months ago
- Process and analyze surfaces using vedo in napari.☆25May 13, 2024Updated last year
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆17Jul 7, 2025Updated 7 months ago
- A fully scalable robust image feature extraction library.☆28Updated this week
- Segment Anything for Microscopy☆647Feb 5, 2026Updated last week
- A napari plugin for clustering objects according to their properties.☆90Jan 26, 2026Updated 2 weeks ago
- Generate multifunctional and macro recordable GUIs from Python classes☆45Nov 16, 2025Updated 2 months ago
- Speed up coding/extending image analysis in Python.☆37Jan 20, 2026Updated 3 weeks ago
- Cell tracking and segmentation software☆168Feb 5, 2026Updated last week
- A napari plugin to view and edit metadata☆13Feb 1, 2026Updated last week
- A stable diffusion demo for napari☆11Dec 15, 2023Updated 2 years ago
- ☆15Jul 29, 2022Updated 3 years ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆61Oct 27, 2024Updated last year
- Course on Deep Learning for imaging using PyTorch☆13Feb 2, 2022Updated 4 years ago
- Segment images utilizing pre-trained neural networks as feature extractors☆47Jan 21, 2026Updated 3 weeks ago
- Image reading, metadata management, and image writing for Microscopy images in Python☆112Dec 22, 2025Updated last month
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30May 1, 2025Updated 9 months ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆21Oct 22, 2025Updated 3 months ago
- Interactive visualization of spatial omics data☆75Feb 1, 2026Updated last week
- Efficient graph data structures and algorithms for fast slicing, visualization, and editing☆13Dec 1, 2025Updated 2 months ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated this week
- Segment anything with our Napari integration of Meta AI's Segment Anything Model (SAM)!☆243Mar 4, 2024Updated last year
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆55Nov 13, 2025Updated 3 months ago
- Accelerated Pixel and Object Classifiers (APOC)☆59Jul 18, 2025Updated 6 months ago
- GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data☆238Feb 21, 2025Updated 11 months ago
- Multiple file format reading directly into napari using pure Python☆39Oct 15, 2025Updated 3 months ago
- ilastik plugin for napari☆14Dec 15, 2025Updated last month
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated 7 months ago
- ☆33May 2, 2025Updated 9 months ago
- Time arrow prediction for live-cell microscopy☆21Jun 17, 2024Updated last year
- Panoptic segmentation algorithms for 2D and 3D electron microscopy in napari☆28Feb 5, 2026Updated last week
- Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python☆221Dec 1, 2025Updated 2 months ago
- A plugin to read whole slide images within napari.☆21Nov 24, 2025Updated 2 months ago
- Paint segmentations directly to on-disk/remote zarr arrays☆15Jun 26, 2024Updated last year
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆84Nov 19, 2025Updated 2 months ago
- Guides and code for 3D nuclear instance segmentation☆22Dec 2, 2025Updated 2 months ago
- ☆25May 16, 2023Updated 2 years ago
- A self-supervised denoising algorithm.☆28Apr 6, 2024Updated last year