royerlab / napari-segment-anything
Segment Anything Model (SAM) native Qt UI
☆196Updated 7 months ago
Alternatives and similar repositories for napari-segment-anything:
Users that are interested in napari-segment-anything are comparing it to the libraries listed below
- ☆228Updated last year
- Code Implementation for EmbedSeg, an Instance Segmentation Method for Microscopy Images☆114Updated last year
- Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.☆88Updated last week
- ☆152Updated this week
- Omnipose: a high-precision solution for morphology-independent cell segmentation☆108Updated last week
- ☆20Updated 2 years ago
- Segment Anything for Medical Imaging☆17Updated this week
- Segment Anything for Microscopy☆489Updated this week
- Segment Anything Model API☆86Updated 6 months ago
- (NeurIPS 2022 CellSeg Challenge - 1st Winner) Open source code for "MEDIAR: Harmony of Data-Centric and Model-Centric for Multi-Modality …☆151Updated 11 months ago
- An extension of 3D Slicer using the Segment Anything Model (SAM) to aid the segmentation of 3D data from tomography or other imaging tech…☆61Updated 9 months ago
- Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (Howeve…☆21Updated last year
- Codebase for "A Foundation Model for Cell Segmentation"☆73Updated this week
- SimpleClick: Interactive Image Segmentation with Simple Vision Transformers (ICCV 2023)☆225Updated last week
- This is an official repo for fine-tuning SAM to customized medical images.☆177Updated 5 months ago
- Python module to analyse skeleton (thin object) images☆121Updated 3 months ago
- PyTorch implementation of 2D and 3D StarDist - Object Detection with Star-convex Shapes☆22Updated 2 years ago
- QuPath extension for Segment Anything Model (SAM)☆103Updated 2 weeks ago
- ☆60Updated last month
- GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data☆219Updated last month
- ☆187Updated last year
- Scalable Instance Segmentation using PyTorch & PyTorch Lightning.☆131Updated 2 weeks ago
- Open source Python library for building bioimage analysis pipelines☆139Updated this week
- PyTorch implementation of SPOCO☆32Updated 7 months ago
- Low rank adaptation for segmentation anything model (SAM)☆218Updated 11 months ago
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆75Updated 3 weeks ago
- StarDist PyTorch☆46Updated 2 years ago
- Cloud-based data annotation tools for biological images☆79Updated last year
- A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data☆151Updated this week
- [ECCV 2024] ScribblePrompt: Fast and Flexible Interactive Segmentation for Any Medical Image☆175Updated this week