fedesemeraro / SlicerTomoSAMLinks
An extension of 3D Slicer using the Segment Anything Model (SAM) to aid the segmentation of 3D data from tomography or other imaging techniques.
☆66Updated 5 months ago
Alternatives and similar repositories for SlicerTomoSAM
Users that are interested in SlicerTomoSAM are comparing it to the libraries listed below
Sorting:
- 3D Slicer extension for Segment Anything Model (SAM) developed by Meta☆68Updated 7 months ago
- SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI☆115Updated last year
- Code for "FastSAM3D: An Efficient Segment Anything Model for 3D Volumetric Medical Images"☆104Updated 9 months ago
- AeroPath: An airway segmentation benchmark dataset with challenging pathology☆45Updated 5 months ago
- Implementation of the DeepVesselNet deep learning network☆152Updated 2 years ago
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆54Updated last month
- An open-source application for the analysis and visualization of segmented vasculature datasets☆127Updated last year
- uniGradICON: A Foundation Model for Medical Image Registration (MICCAI 2024)☆200Updated 2 weeks ago
- Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hiera…☆81Updated last year
- Fully automatic total body segmentation in 3D Slicer using "TotalSegmentator" AI model☆238Updated 2 months ago
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆122Updated last week
- Code for "Segment Anything Model for Medical Image Analysis: an Experimental Study" in Medical Image Analysis☆169Updated last year
- ☆144Updated 2 weeks ago
- Skeleton Recall Loss for Connectivity Conserving and Resource Efficient Segmentation of Thin Tubular Structures☆120Updated 3 weeks ago
- ☆119Updated 2 years ago
- Repository for Vesselness algorithms☆50Updated 2 months ago
- MEDPSeg: Official implementation of Modified EfficientDet for Pulmonary Polymorphic Segmentation☆25Updated 4 months ago
- ☆24Updated last year
- Extension for 3D Slicer for running MONAI Auto3DSeg models☆111Updated 2 months ago
- MIST: A simple and scalable end-to-end framework for 3D medical imaging segmentation.☆52Updated 3 weeks ago
- Segment anything with our Napari integration of Meta AI's Segment Anything Model (SAM)!☆243Updated last year
- A Large-Scale Dataset for Spinal Vertebrae Segmentation in Computed Tomography☆186Updated 7 months ago
- A 3D medical Detection Transformer library. Papers accepted @ MIDL22 & MELBA23/02.☆71Updated last year
- 3D Slicer plugin for Liver Anatomy Annotation by R-Vessel-X☆37Updated last year
- nnInteractive plugin for Napari - nnInteractive is a framework for 3D interactive segmentation, supporting intuitive prompts like points,…☆103Updated 2 months ago
- Convert the TotalSegmentator dataset into the nnUNet format☆19Updated 2 years ago
- Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterat…☆80Updated 3 weeks ago
- Implementation of GroupRegNet: A Groupwise One-shot Deep Learning-based 4D Image Registration Method☆32Updated 4 years ago
- 💥 Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning model☆73Updated last year
- [CVPR 2024] Intraoperative 2D/3D registration via differentiable X-ray rendering☆168Updated 8 months ago