segment-anything-models-java / SAMJ-IJLinks
An ImageJ/Fiji plugin designed to effortlessly integrate Segment-Anything models (SAMs) without code.
☆71Updated last week
Alternatives and similar repositories for SAMJ-IJ
Users that are interested in SAMJ-IJ are comparing it to the libraries listed below
Sorting:
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆80Updated 2 months ago
- ☆51Updated 2 months ago
- Course and exercises on deep learning for microscopy image analysis☆19Updated last month
- StarDist plugin for napari☆38Updated 10 months ago
- Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy☆73Updated 3 months ago
- Cell tracking and segmentation software☆120Updated last week
- A napari plugin for clustering objects according to their properties.☆87Updated last week
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆54Updated 8 months ago
- An introduction to bioimage analysis - http://bioimagebook.github.io☆71Updated 2 weeks ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆50Updated 2 months ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆75Updated last week
- Transformer-based cell tracking for live-cell microscopy☆75Updated last month
- ☆11Updated 3 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆27Updated 2 months ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 2 months ago
- Website for the BioImage Model zoo -- a model zoo for bioimage analysis.☆60Updated 2 weeks ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 5 months ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Updated last year
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆23Updated 7 months ago
- Guides and code for 3D nuclear instance segmentation☆22Updated 2 weeks ago
- Particle tracking by solving linear assignment problem.☆53Updated last month
- A platform for compiling, analyzing, and exploring tracking data☆45Updated 4 months ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆43Updated 2 months ago
- Image reading, metadata management, and image writing for Microscopy images in Python☆92Updated last week
- A module with convenience functions for writing Python code that interacts with OMERO.☆45Updated last week
- Accurate and efficient spot detection for microscopy data☆91Updated last week
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆30Updated last week
- Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more☆140Updated last month
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 3 years ago
- Multiple file format reading directly into napari using pure Python☆37Updated 11 months ago