lens-biophotonics / ZetaStitcherLinks
ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.
☆44Updated last month
Alternatives and similar repositories for ZetaStitcher
Users that are interested in ZetaStitcher are comparing it to the libraries listed below
Sorting:
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated last month
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 4 months ago
- A BaSiC Tool for Background and Shading Correction of Optical Microscopy Images☆61Updated 5 months ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆78Updated 2 weeks ago
- Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microsc…☆35Updated 2 months ago
- A napari plugin for itk-elastix☆39Updated last year
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- ImgLib2/BDV implementation of Stitching for large datasets☆74Updated 3 weeks ago
- simple package for augmentation of n-dimensional arrays☆33Updated 2 years ago
- Lattice light-sheet post-processing utility.☆29Updated 3 weeks ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆67Updated 11 months ago
- 3D Extension of the Cellpose Algorithm by Stringer et al., 2021.☆35Updated 2 years ago
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆82Updated last week
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 6 months ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated 3 weeks ago
- MIST-inspired microscope image stitching package☆74Updated last year
- Website for the BioImage Model zoo -- a model zoo for bioimage analysis.☆60Updated 2 months ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆55Updated 10 months ago
- StarDist plugin for ImageJ☆31Updated 3 years ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆28Updated 3 months ago
- The ImageJ wiki☆28Updated this week
- Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy☆74Updated 4 months ago
- ☆32Updated last year
- Process images using SimpleITK in napari☆21Updated 3 months ago
- MiC is an ImageJ plugin to compare segmentation masks☆19Updated 2 months ago
- ☆13Updated 6 months ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆44Updated 3 months ago
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆80Updated this week
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆67Updated 2 weeks ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 4 months ago