kreshuklab / spocoLinks
PyTorch implementation of SPOCO
☆32Updated 10 months ago
Alternatives and similar repositories for spoco
Users that are interested in spoco are comparing it to the libraries listed below
Sorting:
- official implementation of the PatchPerPix instance segmentation method☆33Updated last year
- Code Implementation for EmbedSeg, an Instance Segmentation Method for Microscopy Images☆114Updated last year
- Python package for deep learning based image to image transformation☆53Updated last year
- Learning to Model Pixel-Embedded Affinity for Homogeneous Instance Segmentation☆12Updated last year
- Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (Howeve…☆22Updated 2 years ago
- simple package for augmentation of n-dimensional arrays☆32Updated last year
- ☆18Updated 2 years ago
- PyTorch implementation of 2D and 3D StarDist - Object Detection with Star-convex Shapes☆24Updated 2 years ago
- Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.☆96Updated this week
- Pytorch implementation of the LearnedRandomWalker module☆29Updated 4 years ago
- ☆25Updated 4 years ago
- Weakly-Supervised Cell Tracking via Backward-and-Forward Propagation, in ECCV 2020☆11Updated 4 years ago
- Unsupervised Instance Segmentation in Microscopy☆23Updated last year
- Utils and convenience functions for large-scale bio-image analysis.☆56Updated last week
- Parameter Efficient Fine-Tuning of Segment Anything Model☆15Updated 2 weeks ago
- Masked Autoencoder Guided Segmentation at Pixel Resolution☆15Updated last year
- ☆17Updated 2 weeks ago
- Grabber: A Tool to Improve Convergence in Interactive Image Segmentation☆18Updated 2 years ago
- Accepted by ISBI 2022 (Oral)☆39Updated 3 years ago
- Convolutional Neural Network-Based Instance Segmentation Algorithm to Acquire Quantitative Criteria of Early Mouse Development☆31Updated 2 years ago
- Generalized algorithm for agglomerative clustering of signed graphs☆13Updated 3 years ago
- This repository hosts the code for HDN (associated with the paper https://arxiv.org/pdf/2104.01374.pdf) for pixel and structured noise re…☆35Updated last year
- 🌈☆56Updated 2 months ago
- Official and maintained implementation of the paper "Attention-Based Transformers for Instance Segmentation of Cells in Microstructures" …☆101Updated 3 years ago
- ☆32Updated 2 years ago
- Repository of scripts to facilitate participation in CellMap's segmentation challenge. This includes downloading data, simple setups for …☆33Updated this week
- Instance segmentation via deep pixel embedding