Alternatives and similar repositories for napari-segment-anything-2

Users that are interested in napari-segment-anything-2 are comparing it to the libraries listed below

• royerlab / ultrack
  Cell tracking and segmentation software
  ☆127Updated last week
• zeissmicroscopy / ZEN_Python_OAD_workshop
  Material to showcase and test several tools and packages releated to ZEN, CZI image files and python packages related to those topics
  ☆17Updated last month
• google-research / sofima
  Scalable Optical Flow-based Image Montaging and Alignment
  ☆80Updated 3 weeks ago
• haesleinhuepf / bia-bob
  BIA Bob is a Jupyter+LLM-based assistant for interacting with image data and for working on Bio-image Analysis tasks.
  ☆117Updated this week
• haesleinhuepf / human-eval-bia
  Benchmarking Large Language Models for Bio-Image Analysis Code Generation
  ☆23Updated 8 months ago
• janelia-cellmap / dacapo
  A framework for easy application of established machine learning techniques on large, multi-dimensional images.
  ☆59Updated 3 months ago
• weigertlab / tarrow
  Time arrow prediction for live-cell microscopy
  ☆19Updated last year
• brainglobe / cellfinder-napari
  Efficient cell detection in large images using cellfinder in napari
  ☆22Updated last year
• matplotlib / napari-matplotlib
  Linking napari layers with Matplotlib plots
  ☆41Updated 3 weeks ago
• sanderslab / magellanmapper
  MagellanMapper is a graphical interface for 3D bioimage annotation, atlas registration, and regional quantification
  ☆22Updated this week
• brainglobe / napari-brainreg
  Visualise brainreg registration output
  ☆10Updated 3 years ago
• JaneliaSciComp / VVDViewer
  3D/4D volumetric rendering of microscopy data
  ☆24Updated 3 months ago
• gioda / FeARLesS
  4D reconstruction of developmental trajectories using spherical harmonics
  ☆22Updated 4 months ago
• brainglobe / cellfinder-core
  Standalone cellfinder cell detection algorithm
  ☆19Updated last year
• clEsperanto / pyclesperanto
  GPU-accelerated Image Processing library for Python
  ☆51Updated this week
• napari / cookiecutter-napari-plugin
  Cookiecutter for napari plugins
  ☆69Updated 9 months ago
• clEsperanto / napari_pyclesperanto_assistant
  GPU-accelerated general purpose image processing and image analysis in napari
  ☆35Updated 3 months ago
• AdaptiveMotorControlLab / CellSeg3D
  A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks
  ☆100Updated last month
• brainglobe / imio
  Loading and saving of image data.
  ☆10Updated last year
• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆56Updated 3 weeks ago
• brainglobe / brainglobe-napari-io
  Read and write files from the BrainGlobe neuroanatomy suite
  ☆14Updated last week
• brainglobe / brainglobe-segmentation
  Segmentation of anatomical structures in a common coordinate space
  ☆33Updated last week
• brainglobe / brainglobe-registration
  Registration to BrainGlobe atlases in napari using Elastix
  ☆22Updated this week
• ilastik / ilastik-napari
  ilastik plugin for napari
  ☆14Updated last year
• haesleinhuepf / napari-simpleitk-image-processing
  Process images using SimpleITK in napari
  ☆21Updated 3 months ago
• haesleinhuepf / stackview
  Interactive image stack viewing in jupyter notebooks based on ipycanvas and ipywidgets
  ☆166Updated 2 months ago
• fractal-napari-plugins-collection / napari-feature-classifier
  ☆23Updated last month
• benlansdell / ethome
  Tools for machine learning of animal behavior
  ☆15Updated last year
• imagej / napari-imagej
  Use ImageJ functionality from napari
  ☆31Updated last week
• pr4deepr / cellpose-colab
  Google Colab notebook for Cellpose
  ☆9Updated 4 months ago