MIC-DKFZ / napari-sam
☆230Updated last year
Alternatives and similar repositories for napari-sam:
Users that are interested in napari-sam are comparing it to the libraries listed below
- Code for "FastSAM3D: An Efficient Segment Anything Model for 3D Volumetric Medical Images"☆90Updated 3 weeks ago
- nnInteractive is a framework for 3D interactive segmentation, supporting intuitive prompts like points, scribbles, bounding boxes, and la…☆119Updated last week
- ☆62Updated 3 weeks ago
- Code for "Segment Anything Model for Medical Image Analysis: an Experimental Study" in Medical Image Analysis☆158Updated 10 months ago
- A 3D Slicer integration to Meta's SAM.☆245Updated last year
- a metric library for Medical Image Segmentation EVALuation☆113Updated 6 months ago
- 3D Slicer Plugin for Segment anything in medical images☆229Updated 2 weeks ago
- Skeleton Recall Loss for Connectivity Conserving and Resource Efficient Segmentation of Thin Tubular Structures☆92Updated 5 months ago
- ☆118Updated 2 years ago
- MONAI Versatile Imaging Segmentation and Annotation☆180Updated last week
- [ECCV 2024] ScribblePrompt: Fast and Flexible Interactive Segmentation for Any Medical Image☆176Updated 3 weeks ago
- A 3D medical Detection Transformer library. Papers accepted @ MIDL22 & MELBA23/02.☆59Updated 9 months ago
- [ISBI 2024] An implementation of SAM3D which adapts Segment Anything Model for Volumetric Medical Image Segmentation☆62Updated 10 months ago
- Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.☆92Updated this week
- [NeurIPS 2023] AbdomenAtlas 1.0 (5,195 CT volumes + 9 annotated classes)☆258Updated 2 months ago
- ☆229Updated last year
- [Nature Machine Intelligence 2024] Code and evaluation repository for the paper☆105Updated last month
- A package to compute medical segmentation metrics.☆157Updated 9 months ago
- ☆146Updated 7 months ago
- 3D Slicer extension for Segment Anything Model (SAM) developed by Meta☆58Updated 6 months ago
- MICCAI 2023 Paper (Early Acceptance)☆181Updated last year
- Segment Anything for Medical Imaging☆18Updated this week
- MONAI Model Zoo that hosts models in the MONAI Bundle format.☆228Updated last week
- CellViT: Vision Transformers for Precise Cell Segmentation and Classification☆282Updated 2 weeks ago
- Deep Learning Framework for Image Classification & Regression in Pytorch for Fast Experiments☆48Updated last month
- MedSAM2: Segment Anything in 3D Medical Images and Videos☆105Updated this week
- An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images☆232Updated this week
- ☆83Updated 4 months ago
- Code for ISBI 2023 paper "Self Pre-training with Masked Autoencoders for Medical Image Classification and Segmentation"☆135Updated last year
- SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI☆81Updated 3 months ago