Alternatives and similar repositories for napari-sam

Users that are interested in napari-sam are comparing it to the libraries listed below

• MIC-DKFZ / nnInteractive
  nnInteractive is a framework for 3D interactive segmentation, supporting intuitive prompts like points, scribbles, bounding boxes, and la…
  ☆266Updated 3 weeks ago
• Project-MONAI / VISTA
  MONAI Versatile Imaging Segmentation and Annotation
  ☆231Updated 2 months ago
• arcadelab / FastSAM3D
  Code for "FastSAM3D: An Efficient Segment Anything Model for 3D Volumetric Medical Images"
  ☆102Updated 5 months ago
• frankkramer-lab / miseval
  a metric library for Medical Image Segmentation EVALuation
  ☆118Updated 11 months ago
• mazurowski-lab / segment-anything-medical-evaluation
  Code for "Segment Anything Model for Medical Image Analysis: an Experimental Study" in Medical Image Analysis
  ☆164Updated last year
• MIC-DKFZ / Skeleton-Recall
  Skeleton Recall Loss for Connectivity Conserving and Resource Efficient Segmentation of Thin Tubular Structures
  ☆111Updated 2 months ago
• bwittmann / transoar
  A 3D medical Detection Transformer library. Papers accepted @ MIDL22 & MELBA23/02.
  ☆69Updated last year
• bingogome / samm
  A 3D Slicer integration to Meta's SAM.
  ☆249Updated last year
• amine0110 / SAM-Medical-Imaging
  ☆119Updated 2 years ago
• halleewong / ScribblePrompt
  [ECCV 2024] ScribblePrompt: Fast and Flexible Interactive Segmentation for Any Medical Image
  ☆196Updated 2 months ago
• MIC-DKFZ / napari-nninteractive
  ☆93Updated last month
• UARK-AICV / SAM3D
  [ISBI 2024] An implementation of SAM3D which adapts Segment Anything Model for Volumetric Medical Image Segmentation
  ☆75Updated last year
• constantinpape / torch-em
  Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.
  ☆106Updated last week
• Project-MONAI / MetricsReloaded
  ☆90Updated 3 months ago
• FZJ-INM1-BDA / celldetection
  Scalable Instance Segmentation using PyTorch & PyTorch Lightning.
  ☆144Updated 4 months ago
• MECLabTUDA / Lifelong-nnUNet
  ☆149Updated 2 months ago
• jocpae / clDice
  ☆245Updated last year
• MrGiovanni / AbdomenAtlas
  [NeurIPS 2023] AbdomenAtlas 1.0 (5,195 CT volumes + 9 annotated classes)
  ☆285Updated last month
• fedesemeraro / SlicerTomoSAM
  An extension of 3D Slicer using the Segment Anything Model (SAM) to aid the segmentation of 3D data from tomography or other imaging tech…
  ☆67Updated 2 months ago
• MIC-DKFZ / image_classification
  Deep Learning Framework for Image Classification & Regression in Pytorch for Fast Experiments
  ☆51Updated 6 months ago
• raidionics / AeroPath
  AeroPath: An airway segmentation benchmark dataset with challenging pathology
  ☆39Updated last month
• Jingnan-Jia / segmentation_metrics
  A package to compute medical segmentation metrics.
  ☆173Updated last year
• JunMa11 / AbdomenCT-1K
  The official repository of "AbdomenCT-1K: Is Abdominal Organ Segmentation A Solved Problem?"
  ☆253Updated last year
• mazurowski-lab / SlicerSegmentWithSAM
  3D Slicer extension for Segment Anything Model (SAM) developed by Meta
  ☆63Updated 3 months ago
• mazurowski-lab / SegmentAnyBone
  SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI
  ☆105Updated 8 months ago
• bowang-lab / MedSAMSlicer
  3D Slicer Plugin for Segment anything in medical images
  ☆254Updated 5 months ago
• Project-MONAI / model-zoo
  MONAI Model Zoo that hosts models in the MONAI Bundle format.
  ☆247Updated last month
• uncbiag / uniGradICON
  uniGradICON: A Foundation Model for Medical Image Registration (MICCAI 2024)
  ☆167Updated this week
• Thanos-DB / FullyConvolutionalTransformer
  [WACV 2023] Official implementation of The Fully Convolutional Transformer for Medical Image Segmentation
  ☆139Updated last year
• amir-aghdam / 3D-UNet
  A pytorch implementation of 3D UNet for 3D MRI Segmentation.
  ☆72Updated 3 years ago