Alternatives and similar repositories for napari-sam

Users that are interested in napari-sam are comparing it to the libraries listed below

• arcadelab / FastSAM3D
  Code for "FastSAM3D: An Efficient Segment Anything Model for 3D Volumetric Medical Images"
  ☆104Updated 8 months ago
• mazurowski-lab / segment-anything-medical-evaluation
  Code for "Segment Anything Model for Medical Image Analysis: an Experimental Study" in Medical Image Analysis
  ☆169Updated last year
• frankkramer-lab / miseval
  a metric library for Medical Image Segmentation EVALuation
  ☆119Updated last year
• halleewong / ScribblePrompt
  [ECCV 2024] ScribblePrompt: Fast and Flexible Interactive Segmentation for Any Medical Image
  ☆204Updated 4 months ago
• MIC-DKFZ / nnInteractive
  nnInteractive is a framework for 3D interactive segmentation, supporting intuitive prompts like points, scribbles, bounding boxes, and la…
  ☆327Updated last week
• Project-MONAI / VISTA
  MONAI Versatile Imaging Segmentation and Annotation
  ☆249Updated last month
• bwittmann / transoar
  A 3D medical Detection Transformer library. Papers accepted @ MIDL22 & MELBA23/02.
  ☆70Updated last year
• amine0110 / SAM-Medical-Imaging
  ☆119Updated 2 years ago
• bingogome / samm
  A 3D Slicer integration to Meta's SAM.
  ☆250Updated last year
• UARK-AICV / SAM3D
  [ISBI 2024] An implementation of SAM3D which adapts Segment Anything Model for Volumetric Medical Image Segmentation
  ☆81Updated last year
• MIC-DKFZ / Skeleton-Recall
  Skeleton Recall Loss for Connectivity Conserving and Resource Efficient Segmentation of Thin Tubular Structures
  ☆119Updated this week
• MECLabTUDA / Lifelong-nnUNet
  ☆155Updated last month
• MIC-DKFZ / napari-nninteractive
  ☆102Updated 2 months ago
• jocpae / clDice
  ☆256Updated last year
• constantinpape / torch-em
  Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.
  ☆110Updated 3 weeks ago
• MrGiovanni / AbdomenAtlas
  [NeurIPS 2023] AbdomenAtlas 1.0 (5,195 CT volumes + 9 annotated classes)
  ☆293Updated 2 weeks ago
• FZJ-INM1-BDA / celldetection
  Scalable Instance Segmentation using PyTorch & PyTorch Lightning.
  ☆145Updated 7 months ago
• Jingnan-Jia / segmentation_metrics
  A package to compute medical segmentation metrics.
  ☆178Updated last year
• mazurowski-lab / SlicerSegmentWithSAM
  3D Slicer extension for Segment Anything Model (SAM) developed by Meta
  ☆68Updated 6 months ago
• ChenLiu-1996 / CUTS
  [MICCAI 2024] CUTS: A Deep Learning and Topological Framework for Multigranular Unsupervised Medical Image Segmentation
  ☆42Updated 6 months ago
• bowang-lab / MedSAMSlicer
  3D Slicer Plugin for Segment anything in medical images
  ☆266Updated 8 months ago
• JunMa11 / AbdomenCT-1K
  The official repository of "AbdomenCT-1K: Is Abdominal Organ Segmentation A Solved Problem?"
  ☆258Updated 2 years ago
• mazurowski-lab / SegmentAnyBone
  SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI
  ☆114Updated 11 months ago
• Project-MONAI / MetricsReloaded
  ☆92Updated 6 months ago
• MIC-DKFZ / MultiTalent
  Implemention of the Paper "MultiTalent: A Multi-Dataset Approach to Medical Image Segmentation"
  ☆61Updated 3 months ago
• fedesemeraro / SlicerTomoSAM
  An extension of 3D Slicer using the Segment Anything Model (SAM) to aid the segmentation of 3D data from tomography or other imaging tech…
  ☆66Updated 4 months ago
• alexanderjaus / AtlasDataset
  ☆46Updated 11 months ago
• amir-aghdam / 3D-UNet
  A pytorch implementation of 3D UNet for 3D MRI Segmentation.
  ☆77Updated 3 years ago
• hhaentze / MRSegmentator
  ☆144Updated 3 months ago
• raidionics / AeroPath
  AeroPath: An airway segmentation benchmark dataset with challenging pathology
  ☆44Updated 4 months ago