ARES implement in PyTorch
☆17Feb 27, 2024Updated 2 years ago
Alternatives and similar repositories for ARES-implement
Users that are interested in ARES-implement are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Lectures and Lab Exercises for Biochem 3BP3 Practical Bioinformatics for the Genomics Era☆15Nov 27, 2025Updated 6 months ago
- NuFold: End-to-End Approach for RNA Tertiary Structure Prediction with Flexible Nucleobase Center Representation☆51Oct 31, 2025Updated 7 months ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆65May 8, 2026Updated last month
- Robust RNA structure refinement by a nucleobase-centric sampling algorithm coupled with a backbone rotameric and quantum-mechanical-energ…☆20Apr 3, 2021Updated 5 years ago
- A unified and modular interface to homology modelling software☆12Sep 27, 2023Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Collisional cross-section prediction for modified and multiconformational peptides☆13Apr 14, 2026Updated last month
- Collection of tools to retrieve siRNA (small interfering RNA) candidate sequences targeting your gene of interest from popular siRNA desi…☆20Nov 22, 2022Updated 3 years ago
- ☆15Jan 27, 2025Updated last year
- A repository for neural representational learning of RNA secondary structures☆32Feb 13, 2020Updated 6 years ago
- Home of the Martini 3 Sterol Parameters☆13Oct 10, 2023Updated 2 years ago
- Scalable Deep Learning for RNA Secondary Structure Prediction☆42Sep 23, 2025Updated 8 months ago
- FaStore - high-performance FASTQ files compressor☆19May 19, 2022Updated 4 years ago
- A pipeline for precise extraction of light curves through forward modelling of a region from time-series wide-field astronomical images☆12Apr 22, 2026Updated last month
- iDeepV: predicting RBP binding sites using vector representation learned from sequences with a CNN.☆10Jul 16, 2019Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆11Nov 8, 2023Updated 2 years ago
- Source code and input files associated to the paper "Targeted free energy perturbation revisited: Accurate free energies from mapped refe…☆13Sep 14, 2021Updated 4 years ago
- EnzyDock: Protein–Ligand Docking of Multiple Reactive States along a Reaction Coordinate in Enzymes☆18Sep 5, 2024Updated last year
- A repository of the analysis and simulation tools for biomolecular modeling, simulations and drug discovery☆13Mar 7, 2025Updated last year
- Modelling RBP binding preferences to predict RPB binding sites☆11Mar 4, 2021Updated 5 years ago
- Source code of the Stanford Ribonanza RNA Folding first place solution☆42Dec 21, 2023Updated 2 years ago
- This repository contains all DeepCLIP Python code☆11May 30, 2024Updated 2 years ago
- Perl scripts for analysis RIC-seq data☆11Feb 6, 2020Updated 6 years ago
- ☆18Apr 13, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- This is my paper.☆12Jun 24, 2023Updated 2 years ago
- Analysis framework of dissipation-corrected targeted molecular dynamics (dcTMD) simulations.☆17Jun 1, 2026Updated last week
- Rethinking Metadynamics: From Bias Potentials to Probability Distributions☆14Sep 18, 2023Updated 2 years ago
- to assess structural quality of RNA using 3D CNN☆15Aug 17, 2018Updated 7 years ago
- ☆38Dec 15, 2023Updated 2 years ago
- Dock Multiple Ligands with AutoDock Vina with one Command☆11Jan 10, 2018Updated 8 years ago
- Predicting RNA 3D structure and conformers using a pre-trained secondary structure model and structure-aware attention☆33Apr 21, 2026Updated last month
- ☆79Apr 22, 2025Updated last year
- Примеры из книги "Глубокое обучение. Погружение в мир нейронных сетей | Архангельская Екатерина Владиславовна, Кадурин А. А." на pytorch☆11Aug 7, 2020Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Contrastive learning of protein representations with graph neural networks for structural and functional annotations☆11Apr 23, 2023Updated 3 years ago
- Nature Methods: RhoFold+, Accurate RNA 3D structure prediction using a language model-based deep learning approach☆237May 29, 2025Updated last year
- Jax code for functional genomics ML☆14Mar 5, 2025Updated last year
- A python script for PyMol to make protein-ligand interaction images.☆18Apr 1, 2025Updated last year
- 🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …☆186Apr 8, 2026Updated 2 months ago
- ☆13Oct 19, 2023Updated 2 years ago
- bpRNA: Large-scale Annotation and Analysis of RNA Secondary Structure☆51Nov 23, 2023Updated 2 years ago