Alternatives and similar repositories for NuFold

Users that are interested in NuFold are comparing it to the libraries listed below

• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆32Updated last year
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆70Updated 2 weeks ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆58Updated last month
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆65Updated last year
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆39Updated last year
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆57Updated 5 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆74Updated 3 months ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆45Updated last month
• KULL-Centre / _2024_cagiada_stability
  ☆71Updated 7 months ago
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆42Updated 5 months ago
• Kuhlman-Lab / evopro
  ☆89Updated 3 weeks ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆71Updated 4 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆53Updated 2 months ago
• liuyf020419 / SCUBA-D
  ☆62Updated last year
• bwicky / oligomer_hallucination
  ☆36Updated last year
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆47Updated 6 months ago
• AbSciBio / igdesign
  ☆47Updated 9 months ago
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆60Updated 2 years ago
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆70Updated last year
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆51Updated 4 months ago
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆67Updated 4 months ago
• rigdenlab / ABCFold
  Scripts to run AlphaFold3, Boltz-1 and Chai-1 with MMseqs2 MSAs and custom templates.
  ☆94Updated last month
• skalyaanamoorthy / PSLMs
  ☆20Updated last year
• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆119Updated 7 months ago
• ShenLab / SeqDance
  code for SeqDance/ESMDance, biophysics-informed protein language models
  ☆41Updated 7 months ago
• jonfunk21 / ProteusAI
  ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…
  ☆64Updated last month
• jafetgado / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆20Updated 6 months ago
• danny305 / StabilityOracle
  ☆29Updated last month
• petergroth / kermut
  This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …
  ☆36Updated 3 months ago
• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆37Updated 2 years ago