Porting of samtools-ruby to BioRuby. Binder of samtools for ruby, on the top of FFI -from original project-
☆34Sep 20, 2019Updated 6 years ago
Alternatives and similar repositories for bioruby-samtools
Users that are interested in bioruby-samtools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- HTSlib bindings for Ruby☆12Jun 19, 2026Updated 3 weeks ago
- This plugins is intended to wrap the common software used for Next Generation Sequencing data☆28Jan 18, 2023Updated 3 years ago
- DBCLS RDFizing database guidelines☆16Aug 31, 2024Updated last year
- Streamable FASTA parser.☆14May 18, 2026Updated last month
- blast, shmlast☆21Oct 5, 2020Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Specific Transposable Element Aligner (HERV-K)☆16Sep 12, 2019Updated 6 years ago
- Identify differentially expressed k-mers between RNA-Seq datasets☆11Mar 1, 2021Updated 5 years ago
- A varitation graph tool☆10Dec 23, 2019Updated 6 years ago
- AlignerBoost is a generalized software toolkit for boosting Next-Gen sequencing mapping precision using a Bayesian based mapping quality …☆11Mar 1, 2022Updated 4 years ago
- An accurate and ultra-fast adapter and quality trimming program for Illumina Next-Generation Sequencing (NGS) data.☆38Jun 19, 2026Updated 3 weeks ago
- De novo assembly of nanopore reads using nextflow☆20Aug 5, 2020Updated 5 years ago
- A command-line finder with fzf☆15Nov 7, 2015Updated 10 years ago
- ☆40Jul 3, 2025Updated last year
- A program for summarising CpG methylation patterns☆20Sep 9, 2016Updated 9 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- An alignment-free approach to estimating exon-inclusion ratios without a reference transcriptome☆10Jan 25, 2019Updated 7 years ago
- A Ruby CalDAV client☆39Jul 26, 2008Updated 17 years ago
- Read contamination removal☆25Jan 24, 2024Updated 2 years ago
- An extensible Ruby on Rails web-service application and database for visualising HTGS data☆18Mar 7, 2014Updated 12 years ago
- This is *NOT* the official repository of samtools.☆49Jun 9, 2017Updated 9 years ago
- S3proxy provides a simple REST-interface to files and keys stored on the AWS S3 service.☆12Apr 2, 2014Updated 12 years ago
- SCOUP is a probabilistic model to analyze single-cell expression data during differentiation☆10Apr 20, 2017Updated 9 years ago
- 🏔 coverage extraction from BAM/CRAM files, supporting targets 📊☆67May 23, 2026Updated last month
- ☆14Aug 30, 2025Updated 10 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Rust implementation of Flavia95's GFAtoVCF☆16Jan 17, 2022Updated 4 years ago
- Automated optimisation of de-novo transcriptome assembly☆25Nov 11, 2015Updated 10 years ago
- ☆11Jan 5, 2021Updated 5 years ago
- Rapid sensitive and accurate read mapping via quasi-mapping☆90Jun 5, 2020Updated 6 years ago
- Mapping-free variant caller for short-read Illumina data☆21Apr 2, 2020Updated 6 years ago
- NGS Data Analysis Textbook Version 2 (Disease Genome Analysis)☆43May 7, 2021Updated 5 years ago
- LEGACY: Git commands to keep a Git repository and Bioconductor SVN in sync☆10Oct 17, 2016Updated 9 years ago
- ☆28Oct 13, 2025Updated 8 months ago
- Python language bindings for bwa☆12Jun 16, 2026Updated 3 weeks ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Integrated platform for unifying scientific workflow management and graph databases for transcriptome data analysis.☆10Oct 19, 2018Updated 7 years ago
- Stupid Simple Structural Variant View☆25Nov 21, 2016Updated 9 years ago
- SkewC a novel quality-assessment method to identify poor quality single-cells in scRNA-seq experiments. The method relies on the measure …☆10Aug 2, 2023Updated 2 years ago
- ODBC binding for Ruby☆20Jun 27, 2024Updated 2 years ago
- ☆13Aug 2, 2023Updated 2 years ago
- Metascape for Bioinformaticians (MSBio)☆13Jun 30, 2021Updated 5 years ago
- ☆11Apr 22, 2022Updated 4 years ago