rjpbonnal / bioruby-samtoolsLinks
Porting of samtools-ruby to BioRuby. Binder of samtools for ruby, on the top of FFI -from original project-
☆33Updated 6 years ago
Alternatives and similar repositories for bioruby-samtools
Users that are interested in bioruby-samtools are comparing it to the libraries listed below
Sorting:
- Smart VCF parser DSL☆83Updated 3 years ago
- An extensible Ruby on Rails web-service application and database for visualising HTGS data☆18Updated 11 years ago
- Tools for bam file processing☆55Updated 10 years ago
- 10x Genomics Reads Simulator☆46Updated last year
- Understand your transcriptome assembly☆102Updated last year
- Utility programs to trim or sort Illumina reads with adapter sequences☆15Updated 12 years ago
- ☆63Updated 5 years ago
- Approach to identify simple and complex structural genomic rearrangements using a randomized approach☆21Updated 7 years ago
- Algorithms to compute DNA complexity☆35Updated 3 years ago
- Merge transcriptome assemblies☆31Updated 9 years ago
- A high throughput sequence read toolset using a streaming approach facilitated by Linux pipes☆51Updated 11 months ago
- Bioinformatics tool outputs converter to JSON or YAML☆35Updated 6 months ago
- A method to identify structural variation from sequencing data in target regions☆32Updated 5 years ago
- Building SuperTranscripts: A linear representation of transcriptome data☆68Updated 4 years ago
- Miscellaneous Bioinformatics scripts etc mostly in Python☆45Updated 2 weeks ago
- Tools for analyzing 10X Genomics data☆42Updated 6 years ago
- full taxonomer cython repository☆22Updated 6 years ago
- A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information☆30Updated 2 years ago
- HTML5 canvas genomic graphics library☆76Updated 6 years ago
- Browser based application for viewing bam alignments☆56Updated 9 years ago
- An awk-like VCF parser☆56Updated last year
- create a gemini-compatible database from a VCF☆55Updated 4 years ago
- Animated GIF of flow cell performance from sequencing summary file.☆13Updated 7 years ago
- Using kallisto for metagenomic analysis☆49Updated 8 years ago
- Mapped QC analysis program☆44Updated 7 years ago
- Splice junction analysis and filtering from BAM files☆42Updated 3 years ago
- A C++ header-only library for reading Oxford Nanopore Fast5 files☆53Updated 3 years ago
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆39Updated 2 years ago
- Analysis tool for Nanopore sequencing data☆34Updated 6 years ago
- Tools for querying and analysis of genomic data☆27Updated last month