related-sciences / gwas-analysisLinks
GWAS data analysis experiments
☆24Updated 5 years ago
Alternatives and similar repositories for gwas-analysis
Users that are interested in gwas-analysis are comparing it to the libraries listed below
Sorting:
- Core pipeline of GenoML☆15Updated 4 years ago
- SEQSpark documentation☆18Updated 4 years ago
- GPU accelerated GWAS framework based on TensorFlow☆34Updated last year
- Python module to read binary Plink files.☆17Updated last year
- Python version of Factored Spectrally Transformed Linear Mixed Models☆52Updated last month
- FireCloud Service Selector (FISS) -- Python bindings and CLI for FireCloud execution engine☆31Updated 3 months ago
- Demonstrating best practices for bioinformatics command line tools☆26Updated 4 years ago
- Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python☆21Updated 2 years ago
- A Python package for gene network analysis☆32Updated 3 years ago
- python wrapper to dpryan79's bigwig library using cffi☆19Updated 9 years ago
- Genetics training camp☆21Updated 4 years ago
- GenomeTools: Scripts and Classes for Working with Genomic Data☆12Updated 7 years ago
- Interface to various variant calling formats.☆30Updated last year
- pathoscore evaluates variant pathogenicity tools and scores.☆21Updated 3 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- Building the constrained coding regions (CCR) model☆16Updated 6 years ago
- A template repository for Snakemake pipepline(s) and a python command-line toolkit.☆28Updated last month
- Bayesian analysis of MPRA and other high-throughput genomic assays☆10Updated 4 years ago
- Code and simulations using biologically annotated neural networks☆21Updated 3 years ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆31Updated 7 years ago
- Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/☆18Updated 6 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 6 years ago
- requirements, examples, and tests for expression matrix file formats☆22Updated 6 years ago
- A Nextflow Genome-Wide Association Study (GWAS) Pipeline☆35Updated last week
- GWAS gold standards repository☆37Updated last year
- Linking GWAS studies to genes through cis-regulatory datasets☆39Updated 2 years ago
- Utilities for analyzing mutations and neoepitopes in patient cohorts☆20Updated 7 years ago
- Easily run WDL workflows on GCP☆13Updated 3 years ago
- An Artificial Neural Network-based discriminator for validating clinically significant genomic variants☆35Updated last year
- Refining the impact of genetic evidence on clinical success☆25Updated 11 months ago