related-sciences / gwas-analysisLinks
GWAS data analysis experiments
☆24Updated 4 years ago
Alternatives and similar repositories for gwas-analysis
Users that are interested in gwas-analysis are comparing it to the libraries listed below
Sorting:
- FireCloud Service Selector (FISS) -- Python bindings and CLI for FireCloud execution engine☆31Updated 2 months ago
- Python version of Factored Spectrally Transformed Linear Mixed Models☆52Updated this week
- Python module to read binary Plink files.☆17Updated 11 months ago
- python wrapper to dpryan79's bigwig library using cffi☆19Updated 9 years ago
- Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python☆21Updated 2 years ago
- requirements, examples, and tests for expression matrix file formats☆22Updated 6 years ago
- Library for indexing VCF files for random access searches by rsID☆17Updated last year
- Genetics training camp☆21Updated 4 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 3 years ago
- GO-PCA: An Unsupervised Method to Explore Gene Expression Data Using Prior Knowledge☆14Updated 7 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆21Updated 3 years ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆28Updated 5 years ago
- A Feature Density Estimator for High-Throughput Sequence Tags☆23Updated 4 years ago
- Opossum is a tool to pre-process RNA-seq reads prior to variant calling.☆28Updated 6 years ago
- Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each alle…☆45Updated 2 years ago
- Stupid Simple Elastic Compute Cloud☆16Updated last year
- SEQSpark documentation☆18Updated 4 years ago
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆33Updated 3 months ago
- Interface to various variant calling formats.☆30Updated 11 months ago
- Scripts supporting identification of genomic features affecting survival time in cancer☆12Updated 6 years ago
- Building the constrained coding regions (CCR) model☆16Updated 6 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated 9 months ago
- Universal RObust Peak Annotator☆16Updated last year
- Samwell: a python package for using genomic files... well☆20Updated 2 years ago
- provides common tools and lookup tables used primarily by the hgvs and uta packages☆22Updated 3 months ago
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Updated 3 years ago
- Convert bioinformatics file formats to Zarr☆35Updated last week
- Utilities for analyzing mutations and neoepitopes in patient cohorts☆20Updated 6 years ago
- High-throughput gene to knowledge mapping through massive integration of public sequencing data.☆31Updated 6 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago