opentargets / genetics-finemappingLinks
Fine-mapping pipeline for Open Targets Genetics
☆27Updated 3 years ago
Alternatives and similar repositories for genetics-finemapping
Users that are interested in genetics-finemapping are comparing it to the libraries listed below
Sorting:
- GWAS gold standards repository☆39Updated last year
- Convert GWAS summary statistics to VCF☆48Updated 2 years ago
- Linking GWAS studies to genes through cis-regulatory datasets☆39Updated 2 years ago
- Repository for resources we'd like to share with the community.☆25Updated 3 years ago
- Create regional association plots from GWAS or meta-analysis☆61Updated 5 years ago
- Open Targets python framework for post-GWAS analysis☆49Updated this week
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆14Updated last year
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆43Updated 11 months ago
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 5 years ago
- Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization☆26Updated 6 years ago
- ☆50Updated this week
- processes GoT amplicon data and generates a table of metrics☆32Updated 3 years ago
- Read PLINK BED/BIM/FAM files into R☆41Updated 4 years ago
- Proteome-Wide Association Study☆50Updated 4 years ago
- Explore and download data from the recount3 project☆36Updated last month
- causal TWAS (cTWAS)☆47Updated this week
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- ☆24Updated 4 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- Fuji plot—a circos representation of multiple GWAS results—☆92Updated 5 months ago
- Functional genomics and genome-wide association studies☆67Updated 7 years ago
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆29Updated last year
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆30Updated last year
- GREAT Analysis - Functional Enrichment on Genomic Regions☆93Updated 2 weeks ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆47Updated 2 weeks ago
- This github repository contains code to reproduce the analysis in our paper "Variability in estimated gene expression among commonly used…☆29Updated last year
- ☆13Updated 7 years ago
- software package for integrative genetic association analysis☆35Updated 2 years ago
- Sample code for ldsc analyses in UKBB☆31Updated 2 years ago