opentargets / genetics-finemappingView external linksLinks
Fine-mapping pipeline for Open Targets Genetics
☆28Sep 6, 2022Updated 3 years ago
Alternatives and similar repositories for genetics-finemapping
Users that are interested in genetics-finemapping are comparing it to the libraries listed below
Sorting:
- Colocalisation pipeline for Open Targets Genetics☆17Apr 8, 2022Updated 3 years ago
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 5 years ago
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Feb 27, 2020Updated 5 years ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆35Jun 17, 2025Updated 7 months ago
- An R package for plotting GWAS results from the GAPIT package☆14Oct 9, 2025Updated 4 months ago
- ☆10Feb 25, 2024Updated last year
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated last year
- ☆24Aug 6, 2021Updated 4 years ago
- GWAS gold standards repository☆40Nov 23, 2023Updated 2 years ago
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆14Dec 23, 2022Updated 3 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 2 years ago
- A GWAS fine-mapping pipeline used in CAUSALdb☆27May 1, 2022Updated 3 years ago
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 4 years ago
- Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis☆18Mar 18, 2025Updated 10 months ago
- Code to reproduce analyses in Nasser, Bergman, Fulco, Guckelberger, Doughty et al Nature 2021☆16Apr 8, 2021Updated 4 years ago
- Regional association plots☆26Apr 1, 2024Updated last year
- RSS-NET: Regression with Summary Statistics exploiting Network Topology☆19Apr 23, 2025Updated 9 months ago
- Fine-mapping with infinitesimal effects☆20May 27, 2025Updated 8 months ago
- In-house computational biology workflows at Columbia Neurology☆36Sep 7, 2025Updated 5 months ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Aug 2, 2022Updated 3 years ago
- R interface to genome annotation files and the UCSC genome browser☆35Dec 25, 2025Updated last month
- RSS: Regression with Summary Statistics☆51Sep 16, 2024Updated last year
- Bedfile perturbation tool☆17Sep 29, 2025Updated 4 months ago
- Data visualization and Information Design with Python and R☆18Mar 31, 2023Updated 2 years ago
- Mixed Model Package For Genome-wide association mapping.☆17Mar 31, 2019Updated 6 years ago
- ☆34Mar 7, 2021Updated 4 years ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆59Nov 18, 2022Updated 3 years ago
- Fast API server for calculating linkage disequilibrium☆20Apr 24, 2025Updated 9 months ago
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆21Aug 19, 2025Updated 5 months ago
- bioinformatics learning☆13Oct 10, 2023Updated 2 years ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- Repository☆10Oct 23, 2024Updated last year
- ☆24Nov 9, 2017Updated 8 years ago
- Read PLINK BED/BIM/FAM files into R☆45Jul 26, 2021Updated 4 years ago
- ☆21Nov 15, 2024Updated last year
- Use gene expression to predict phenotype sample information☆19Feb 13, 2018Updated 8 years ago
- A collection of python and bash scripts for various bioinformatics-related tasks☆12Sep 19, 2024Updated last year
- Westlake BioBank for Chinese pilot project☆10May 17, 2023Updated 2 years ago
- Pipeline in place at the UGI for DNA level analysis☆11Aug 29, 2016Updated 9 years ago