statgen / swissLinks
Software to help identify overlap between association scan results and GWAS hit catalogs.
☆15Updated 3 years ago
Alternatives and similar repositories for swiss
Users that are interested in swiss are comparing it to the libraries listed below
Sorting:
- software package for integrative genetic association analysis☆35Updated 2 years ago
- Specification for the GWAS-VCF format (manuscript in preparation)☆25Updated 4 years ago
- ☆40Updated 7 years ago
- Scripts used for generating Neale Lab UKB results☆20Updated 3 years ago
- ☆13Updated 2 years ago
- Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization☆26Updated 6 years ago
- ☆35Updated 2 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆47Updated 2 years ago
- Main ricopili repo for public releases☆50Updated 7 months ago
- Functional genomics and genome-wide association studies☆67Updated 7 years ago
- List of software packages for multi-trait / multiple-trait / multivariate / high-dimensional GWAS☆31Updated 6 months ago
- Mediated Expression Score Regression (MESC)☆26Updated this week
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆14Updated last year
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆35Updated 8 months ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆54Updated 2 weeks ago
- Stratified squared trans-ethnic genetic correlation☆14Updated 3 years ago
- An R package for detecting Gene-by-Environment (GxE) interaction effects on the transcriptome using Allele Specific Expression quantified…☆22Updated 4 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆30Updated last year
- GWAS gold standards repository☆39Updated last year
- Older repo for MRLocus. See new website for software usage guide:☆15Updated 2 years ago
- Get SNP proxies from the 1000 Genomes Project.☆30Updated 7 years ago
- An R package for creating mirrored Manhattan plots☆18Updated 3 years ago
- ☆22Updated last month
- Multi-Omic Strategies for TWAS☆13Updated 2 years ago
- Create LocusZoom-style plots in R.☆22Updated 2 years ago
- Code and simulations using biologically annotated neural networks☆21Updated 4 years ago
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 5 years ago
- Code for implementing Mendelian randomization investigations☆19Updated 10 years ago
- Tissue of ACTion scores for Investigating Complex trait-Associated Loci☆13Updated 4 years ago
- GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with popula…☆42Updated last month