Software to help identify overlap between association scan results and GWAS hit catalogs.
☆15Aug 26, 2022Updated 3 years ago
Alternatives and similar repositories for swiss
Users that are interested in swiss are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A flexible tool for meta-analysis☆11Jul 31, 2024Updated last year
- Mutation rate analysis of autosomal loci☆15Jun 25, 2020Updated 6 years ago
- ☆39Jun 15, 2023Updated 3 years ago
- Multi-omics module that includes RNAseq, Epigenetics, and integrated multi-omics analyses developed as part of the NIGMS Sandbox project☆14Jun 6, 2025Updated last year
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆20Mar 30, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- lhcMR☆26Mar 24, 2024Updated 2 years ago
- TWAS-pipeline☆24Feb 21, 2021Updated 5 years ago
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- Meta-analysis of genomewide association scans☆66Jul 18, 2024Updated 2 years ago
- Imputation pipeline for Open Humans☆18Updated this week
- A rapido and lightweight method for PGS computation☆14Apr 20, 2026Updated 3 months ago
- Python script for multivariate GWAS meta-analysis☆25Dec 6, 2024Updated last year
- GREP: Genome for REPositioning drugs☆45Jan 11, 2023Updated 3 years ago
- A repository that houses example code, applications and teaching material related to QuantEcon☆12Aug 9, 2018Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Multi-Omic Strategies for TWAS☆13Mar 27, 2023Updated 3 years ago
- GWAS Summary Statistics for Brain Imaging Phenotypes☆21Sep 6, 2021Updated 4 years ago
- RNF framework for NGS: simulation of reads, evaluation of mappers, conversion of RNF-compliant data.☆14Nov 10, 2025Updated 8 months ago
- Polynomial Mendelian randomization for the inference of non-linear causal effects☆14Apr 20, 2023Updated 3 years ago
- Probabilistic single-cell pseudotime with Edward+Tensorflow☆12Oct 5, 2017Updated 8 years ago
- GTM and t-SNE classification and clustering of 1000 Genomes Project populations☆13Feb 18, 2019Updated 7 years ago
- Multivariate Omnibus Statistical Test☆23Jul 2, 2024Updated 2 years ago
- ☆18Aug 14, 2017Updated 8 years ago
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆25Apr 25, 2023Updated 3 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Michigan Imputation Server: A new web-based service for imputation that facilitates access to new reference panels and greatly improves u…☆86Sep 28, 2024Updated last year
- Featherweight embedded probabilistic programming language and compositional inference programming library☆18May 15, 2020Updated 6 years ago
- Package for genetic network analysis of GWAS summary statistics☆18Aug 24, 2025Updated 10 months ago
- THIS IS THE OLD REPO: Use this one instead: https://github.com/monarch-initiative/mondo-build☆17Feb 5, 2021Updated 5 years ago
- ILIAD: A suite of automated Snakemake workflows for processing genomic data for downstream applications☆29Dec 12, 2023Updated 2 years ago
- Overlapping Reads COmpression with Minimizers☆16May 19, 2022Updated 4 years ago
- Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1☆18Apr 24, 2020Updated 6 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆19Jun 29, 2022Updated 4 years ago
- Regional association plots☆27Apr 1, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- GEAR [GEnetic Analysis Repository], contact chenguobo@gmail.com;☆21Dec 31, 2021Updated 4 years ago
- A Biostatistical tool for Transcriptomics Analysis☆22Feb 19, 2022Updated 4 years ago
- A powerful TWAS framework leveraging summary-level reference data☆35Apr 1, 2025Updated last year
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆213Jul 6, 2023Updated 3 years ago
- corrplot of LDSC genetic correlation results☆58Mar 16, 2022Updated 4 years ago
- ActiveDriverDB☆12May 1, 2023Updated 3 years ago
- This is a pipeline for calculating weights for TWAS☆35Aug 3, 2022Updated 3 years ago