fastlmm / FaST-LMMLinks
Python version of Factored Spectrally Transformed Linear Mixed Models
☆54Updated 6 months ago
Alternatives and similar repositories for FaST-LMM
Users that are interested in FaST-LMM are comparing it to the libraries listed below
Sorting:
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆76Updated 2 months ago
- ☆48Updated 5 months ago
- Fuji plot—a circos representation of multiple GWAS results—☆92Updated 7 months ago
- A Python package for creating high-quality manhattan and Q-Q plots from GWAS results.☆48Updated 2 years ago
- Linear mixed model for genomic analyses.☆111Updated 4 years ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆54Updated 2 months ago
- Repository for resources we'd like to share with the community.☆25Updated 3 years ago
- GWAS gold standards repository☆39Updated 2 years ago
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆35Updated 3 weeks ago
- Development for SAIGE and SAIGE-GENE(+)☆85Updated last month
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆21Updated 8 years ago
- Code associated with 2019 manuscript entitled "Transcript expression-aware annotation improves rare variant discovery and interpretation…☆34Updated 3 years ago
- JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes☆24Updated 11 months ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- ☆21Updated 2 years ago
- ☆40Updated 5 months ago
- ☆27Updated 6 months ago
- Every Gene Ever Annotated in published GWAS☆50Updated 3 years ago
- ☆84Updated 3 months ago
- Short Time-series Expression Miner (STEM) and Dynamic Regulatory Events Miner (DREM)☆21Updated 5 years ago
- Universal RObust Peak Annotator☆16Updated 2 years ago
- GPU accelerated GWAS framework based on TensorFlow☆33Updated 2 years ago
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆37Updated 4 years ago
- Merge fastq files split over lanes☆20Updated 7 years ago
- Genome-wide association studies tutorial 🧬☆53Updated 6 years ago
- Imputation Server 2 workflow to facilitate genotype imputation at scale.☆39Updated 3 weeks ago
- Bioinformatics one-liner for 100 days☆49Updated last year
- Tutorials covering various topics in genomic data analysis.☆16Updated 7 years ago
- GCTA software☆104Updated 5 months ago
- List of software packages for multi-trait / multiple-trait / multivariate / high-dimensional GWAS☆31Updated 3 weeks ago