provides common tools and lookup tables used primarily by the hgvs and uta packages
☆25Jan 12, 2026Updated 2 months ago
Alternatives and similar repositories for bioutils
Users that are interested in bioutils are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- non-redundant, compressed, journalled, file-based storage for biological sequences☆49Nov 10, 2025Updated 4 months ago
- Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…☆71Updated this week
- Lightweight, portable variation registration and retrieval☆16Mar 13, 2026Updated 2 weeks ago
- Python library to parse, format, validate, normalize, and map sequence variants according to HGVS Nomenclature (https://hgvs-nomenclature…☆289Mar 17, 2026Updated last week
- A tool to analyze telomeric reads from WGS or telobait-capture long-read sequencing data☆10Oct 1, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- A port of biocommons/hgvs to the Rust programming language☆17Updated this week
- A set of tools to annotate VCF files with expression and readcount data☆30Jan 30, 2026Updated last month
- CNV detection tool for targeted NGS panel data☆16Feb 28, 2022Updated 4 years ago
- This GCI/VCI 1.0 platform has now been retired, and replaced with our new 2.0 platform:☆25Sep 16, 2022Updated 3 years ago
- simplified searching, fetching, and parsing records from NCBI using their E-utilities interface☆63Feb 9, 2026Updated last month
- Multi-omics factor analysis v2☆59Jan 26, 2026Updated 2 months ago
- ☆23Feb 25, 2026Updated last month
- drunk on perbase pileups and lua expressions☆19Nov 15, 2025Updated 4 months ago
- Software for the analysis and visualization of site-saturation mutagenesis experiments☆19Apr 21, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- simple bioinformatics command-line (t)ools (i) (w)ished (i) (h)ad.☆44Mar 29, 2023Updated 2 years ago
- GA4GH Variation Representation Python Implementation☆62Feb 24, 2026Updated last month
- Find common blocks and differences between DNA sequences☆42Nov 5, 2025Updated 4 months ago
- Curated list of resources for variant prioritization☆14Nov 18, 2025Updated 4 months ago
- ☆17Apr 4, 2025Updated 11 months ago
- Utilities to detect and profile `het-kmers`☆12Aug 5, 2024Updated last year
- The java implementation of the MMTF API, decoder and encoder.☆11Dec 19, 2025Updated 3 months ago
- Clin.iobio - Workflow and reporting for iobio variant analysis pipeline☆12Oct 7, 2025Updated 5 months ago
- Framework to benchmark algorithms when detecting germline copy number variations (CNVs) from NGS data☆14Dec 24, 2024Updated last year
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A webtool for the clinical interpretation of CNVs in rare disease patients☆13Jun 10, 2022Updated 3 years ago
- Plotly BioVisualization 🎯 Interactive Needle and Manhattan Plots & Alignment Viewer☆11Feb 28, 2020Updated 6 years ago
- Structural variant benchmark☆22Mar 4, 2025Updated last year
- Long read to reference genome mapping tool☆13Mar 14, 2024Updated 2 years ago
- A Variant Call Format reader for Python.☆59May 6, 2025Updated 10 months ago
- Split a BAM file by haplotype support☆16Dec 13, 2017Updated 8 years ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆37May 21, 2024Updated last year
- Merging, Annotation, Validation, and Illustration of Structural variants☆75Aug 22, 2023Updated 2 years ago
- Bioinformatics Hub RNAseq snakemake pipeline☆14Jan 30, 2018Updated 8 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A standalone program that reads files created with the graphical network editor Escher and converts them to files in community standard f…☆16Mar 4, 2026Updated 3 weeks ago
- Genomic Visualization Catalog☆13Oct 6, 2022Updated 3 years ago
- DTU analysis tool inspired by llamas☆12Sep 28, 2025Updated 6 months ago
- Genomic sequence preprocessing toolkit☆13Jan 13, 2026Updated 2 months ago
- Arima Capture HiC pipeline (Arima-CHiC)☆12May 16, 2024Updated last year
- All-FIT - Allele-Frequency-based Imputation of Tumor Purity☆18Oct 5, 2019Updated 6 years ago
- knowledge-based genotyping of cancer hotspots from the tumor BAM files☆22Dec 14, 2021Updated 4 years ago