provides common tools and lookup tables used primarily by the hgvs and uta packages
☆25Oct 24, 2026Updated this week
Alternatives and similar repositories for bioutils
Users that are interested in bioutils are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- non-redundant, compressed, journalled, file-based storage for biological sequences☆52Updated this week
- Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…☆73Jun 27, 2026Updated 4 months ago
- Python library to parse, format, validate, normalize, and map sequence variants according to HGVS Nomenclature (https://hgvs-nomenclature…☆295Updated this week
- Lightweight, portable variation registration and retrieval☆17Oct 23, 2026Updated last week
- A port of biocommons/hgvs to the Rust programming language☆18Updated this week
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- A tool to analyze telomeric reads from WGS or telobait-capture long-read sequencing data☆10Oct 1, 2024Updated 2 years ago
- Website to analyze conflicting assertions in ClinVar☆20Mar 16, 2026Updated 7 months ago
- simplified searching, fetching, and parsing records from NCBI using their E-utilities interface☆63Jun 23, 2026Updated 4 months ago
- Python drop-in replacement for PyHPO using Rust☆13Dec 9, 2025Updated 10 months ago
- Transcript versions for HGVS libraries☆42Oct 12, 2026Updated 2 weeks ago
- This GCI/VCI 1.0 platform has now been retired, and replaced with our new 2.0 platform:☆26Sep 16, 2022Updated 4 years ago
- Flame: Functional enrichment analysis using multiple gene lists☆13May 21, 2025Updated last year
- CNV detection tool for targeted NGS panel data☆17Feb 28, 2022Updated 4 years ago
- A set of tools to annotate VCF files with expression and readcount data☆32Oct 13, 2026Updated 2 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- simple bioinformatics command-line (t)ools (i) (w)ished (i) (h)ad.☆44Mar 29, 2023Updated 3 years ago
- Split a BAM file by haplotype support☆16Dec 13, 2017Updated 8 years ago
- Curated list of resources for variant prioritization☆16Nov 18, 2025Updated 11 months ago
- Visualize next generation sequencing reads over putative structural variants☆13Aug 25, 2014Updated 12 years ago
- Software for the analysis and visualization of site-saturation mutagenesis experiments☆19Apr 21, 2023Updated 3 years ago
- Jama - Java Matrix OSGi version with tycho build☆11May 24, 2016Updated 10 years ago
- Find common blocks and differences between DNA sequences☆46Nov 5, 2025Updated 11 months ago
- Clin.iobio - Workflow and reporting for iobio variant analysis pipeline☆12Oct 7, 2025Updated last year
- GA4GH Variation Representation Python Implementation☆64Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Python function for TMB snake plots☆16Feb 12, 2026Updated 8 months ago
- drunk on perbase pileups and lua expressions☆19Nov 15, 2025Updated 11 months ago
- Framework to benchmark algorithms when detecting germline copy number variations (CNVs) from NGS data☆14Dec 24, 2024Updated last year
- Plotly BioVisualization 🎯 Interactive Needle and Manhattan Plots & Alignment Viewer☆11Feb 28, 2020Updated 6 years ago
- A webtool for the clinical interpretation of CNVs in rare disease patients☆14Jun 10, 2022Updated 4 years ago
- The java implementation of the MMTF API, decoder and encoder.☆14Dec 19, 2025Updated 10 months ago
- Portable Crystal binary distributions for Linux on x86_64☆15Mar 22, 2021Updated 5 years ago
- Structural variant benchmark☆25Mar 4, 2025Updated last year
- ☆14Jun 3, 2022Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- The Protein Feature View - a SVG library for visualising protein annotations☆13Sep 18, 2017Updated 9 years ago
- Services and guidelines for normalizing variants☆17Oct 12, 2026Updated 2 weeks ago
- Long read to reference genome mapping tool☆13Mar 14, 2024Updated 2 years ago
- All-FIT - Allele-Frequency-based Imputation of Tumor Purity☆19Oct 5, 2019Updated 7 years ago
- ☆23Aug 10, 2026Updated 2 months ago
- A fast Python library for VCF files leveraging Cython for speed.☆54Mar 27, 2018Updated 8 years ago
- Explore the world of genome assembly and gain an understanding of the power and pitfalls of sequencing technologies and assembly techniqu…☆12Jan 26, 2019Updated 7 years ago