Mutation tracker for microbial genomes
☆14Sep 30, 2020Updated 5 years ago
Alternatives and similar repositories for MicroGMT
Users that are interested in MicroGMT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- finding conserved regions in highly diverse genomes☆16May 25, 2026Updated last month
- genome sized sequences clustering☆17Dec 29, 2020Updated 5 years ago
- Python/TF1 implementation of DeepAccNet (https://www.biorxiv.org/content/10.1101/2020.07.17.209643v1)☆10Sep 2, 2020Updated 5 years ago
- 🧬 Viral genome reference alignment☆12Jan 26, 2021Updated 5 years ago
- Isoform-level expression patterns in single-cell RNA-sequencing data☆12Apr 20, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- The original version of MGA has been archived - please see https://github.com/crukci-bioinformatics/mga2 instead.☆24Apr 15, 2021Updated 5 years ago
- ☆22Feb 12, 2026Updated 4 months ago
- Convert CWL to WDL☆17Oct 17, 2016Updated 9 years ago
- 🐦 spideog - Command line utility for Kraken2 reports.☆11Nov 30, 2020Updated 5 years ago
- Wavefront alignment algorithm (WFA) in Golang☆32Jul 26, 2025Updated 11 months ago
- Command line client and Python libraries for CosmosID API☆13Oct 28, 2025Updated 8 months ago
- NGSTools☆16Mar 3, 2017Updated 9 years ago
- A SARS-CoV-2 Mutation Pattern Query Tool☆17Mar 21, 2023Updated 3 years ago
- accessory functions for processing microbial community data☆12Dec 24, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A project to develop the R Shiny applications.☆12May 13, 2019Updated 7 years ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Jun 18, 2026Updated 2 weeks ago
- pre-process illumina reads☆19Oct 27, 2022Updated 3 years ago
- ☆13Sep 18, 2017Updated 8 years ago
- A multiple alignment analyser☆21Jul 28, 2021Updated 4 years ago
- ☆15Aug 18, 2025Updated 10 months ago
- Gene expression viewer template☆12Aug 30, 2017Updated 8 years ago
- ☆13Oct 17, 2021Updated 4 years ago
- ☆12Oct 19, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Creates a target specific exome_full192.coverage.txt file required by MutSig☆21Sep 15, 2021Updated 4 years ago
- ☆11May 6, 2021Updated 5 years ago
- Swift Phenotypic Analysis of Cells☆10Jun 8, 2025Updated last year
- Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…☆23Mar 29, 2021Updated 5 years ago
- 用每个窗口的read数作为特征、胎儿浓度作为标签,训练神经网络模型;训练完成的神经网络模型可用于NIPT胎儿浓度的预测☆11Jun 10, 2022Updated 4 years ago
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Nov 17, 2021Updated 4 years ago
- The is a repository containing MATLAB and Python code used in teaching graduate students in neuroscience.☆14Jan 20, 2022Updated 4 years ago
- Somatic variant identification from unpaired samples☆15Jan 31, 2017Updated 9 years ago
- Parallel implementation of the LAST aligner☆18Nov 27, 2016Updated 9 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Documentation for the ISB-CGC on Read the Docs.☆11Apr 15, 2026Updated 2 months ago
- Microbiota Analysis in R Easily☆12Jul 14, 2022Updated 3 years ago
- coursier CLI launchers☆15Jun 22, 2026Updated last week
- The MBatch R package and Docker image are designed to help assess and correct for batch effects.☆19May 31, 2024Updated 2 years ago
- SPRINT: Scoring PRotein INTeractions☆16Aug 11, 2020Updated 5 years ago
- Permutation Tests for Linear Models☆16Nov 21, 2025Updated 7 months ago
- ☆14Dec 12, 2017Updated 8 years ago