proudquartz / hiprfish
☆11Updated 3 years ago
Alternatives and similar repositories for hiprfish:
Users that are interested in hiprfish are comparing it to the libraries listed below
- MGKit: Metagenomics Framework☆17Updated 2 years ago
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Updated 6 years ago
- De novo transcriptome assembler for short reads☆62Updated 7 years ago
- Master of Pores 2☆23Updated 4 months ago
- OPAL: Open-community Profiling Assessment tooL☆28Updated 3 months ago
- The Mouse Gastrointestinal Bacteria Catalogue☆15Updated 3 years ago
- Maximum likelihood demultiplexing☆47Updated 2 months ago
- shotgun pipeline☆12Updated 6 years ago
- ☆15Updated 6 years ago
- Simple utility to concatenate .fastq(.gz) files whilst creating a summary of the sequences.☆36Updated last month
- A tool to assess the quality and distribution of genomic data☆16Updated 3 years ago
- Annotating principal splice isoforms☆14Updated 6 months ago
- command lines tool to annotate miRNAs with a standard mirna/isomir naming☆18Updated 2 weeks ago
- Community effort to evaluate computational methods for the detection and quantification of poly(A) sites and estimating their differentia…☆13Updated last year
- Workflows for metagenomic sequence data processing and analysis.☆17Updated 5 years ago
- Manuscript describing ChronQC is now available online in Bioinformatics☆18Updated 5 years ago
- FishTaco (Functional Shifts Taxonomic Contributors) is a metagenomic computational framework that aims to identify the driver taxa of mic…☆24Updated 3 years ago
- Samwell: a python package for using genomic files... well☆20Updated 2 years ago
- The software involved in the MetaPhase project, as described in G3 (http://dx.doi.org/10.1534/g3.114.011825)☆17Updated 6 years ago
- deSALT - De Bruijn graph-based Spliced Aligner for Long Transcriptome reads☆43Updated 2 years ago
- REINDEER REad Index for abuNDancE quERy☆57Updated 9 months ago
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Updated 6 years ago
- Functions for reproducibly Obtaining and Normalizing Data re-Used from Elsewhere☆21Updated 2 weeks ago
- Highly sensitive pathogen detection☆12Updated 4 years ago
- MetaWIBELE: Workflow to Identify novel Bioactive Elements in microbiome☆21Updated this week
- Tools for generating and decoding error-correcting DNA barcodes☆16Updated 3 years ago
- Fast FASTQ sample demultiplexing in Rust.☆62Updated 2 weeks ago
- A high throughput sequence read toolset using a streaming approach facilitated by Linux pipes☆49Updated 3 months ago
- kASA - k-Mer Analysis of Sequences based on Amino acid-like encoding☆23Updated last year
- Re-analysis of data provided by Gihawi et al. 2023 bioRxiv☆26Updated last year