clij / clijpyLinks
GPU-accelerated image processing using CLIJ via pyimagej in python
☆10Updated 4 years ago
Alternatives and similar repositories for clijpy
Users that are interested in clijpy are comparing it to the libraries listed below
Sorting:
- Various parts made for fluorescence microscopy + optics work☆16Updated 6 years ago
- my first baby steps with Napari☆10Updated 5 years ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 4 months ago
- Lattice light-sheet post-processing utility.☆29Updated 3 weeks ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated 3 weeks ago
- Things we use regularly☆29Updated 3 weeks ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆67Updated 2 weeks ago
- ☆13Updated last year
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- ☆13Updated 5 years ago
- GPU Deconvolution Library with C and Matlab API for nVidia GPUs☆21Updated 6 years ago
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Updated 2 years ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- python tools for BigDataViewer☆22Updated 8 months ago
- GDSC Single Molecule Light Microscopy ImageJ Plugins☆16Updated this week
- ☆25Updated last month
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆27Updated 5 years ago
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Updated 4 years ago
- GPU accelerated 3D image deconvolution using CUDA☆36Updated last year
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- ☆38Updated last year
- ☆13Updated 5 years ago
- An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.☆19Updated 2 weeks ago
- ☆10Updated 9 months ago
- Napari gaming☆17Updated 3 years ago
- Process images using SimpleITK in napari☆21Updated 3 months ago
- A Python module for accessing Hamamatsu DCIMG files☆14Updated 2 years ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 4 years ago
- ImageJ convenience layer for N5☆17Updated last week
- A python library for advanced lattice light-sheet image analysis☆21Updated 4 years ago