imcf / auto-tx
Official GitHub mirror of the AutoTx intelligent background transfer service.
☆26Updated last month
Alternatives and similar repositories for auto-tx:
Users that are interested in auto-tx are comparing it to the libraries listed below
- Browse your OMERO database from within napari.☆35Updated this week
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Updated 7 years ago
- Generate markdown notebooks from ImageJ Macro☆24Updated 3 years ago
- A Board Game to teach co-localization analysis☆12Updated 4 months ago
- ☆17Updated 2 years ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆41Updated 4 months ago
- ☆47Updated 4 months ago
- Control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 3 weeks ago
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Updated last year
- Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ☆24Updated 2 years ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated last year
- An OMERO CLI plugin for creating transfer packets between OMERO servers.☆17Updated 2 months ago
- Use Napari Viewer to display CZI images☆11Updated 2 years ago
- ☆13Updated 4 years ago
- ☆10Updated 3 months ago
- python tools for BigDataViewer☆21Updated 2 months ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆28Updated last month
- ☆38Updated this week
- ☆29Updated 11 months ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated 2 months ago
- Lectures for a napari training course☆50Updated last year
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆36Updated last week
- Basic example of using OME-Zarr in a Nextflow pipeline☆15Updated 3 months ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- Running compute-intense parts of BigStitcher distributed☆23Updated this week
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 3 years ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 3 months ago
- A tool for manual pointwise deformable registration using bigdataviewer.☆27Updated 3 weeks ago
- Imagej toolset to ease hyperstacks visualization and handling☆22Updated 4 months ago
- Detection of Molecules plugin for ImageJ, Utrecht University☆15Updated 2 years ago