philippbayer / orthomclToVennLinks
Creates Venn diagrams for OrthoMCL output
☆17Updated 8 years ago
Alternatives and similar repositories for orthomclToVenn
Users that are interested in orthomclToVenn are comparing it to the libraries listed below
Sorting:
- Genome Annotation Pipeline☆42Updated last year
- A shiny application to visualize MCscan result☆38Updated 3 years ago
- PlantTribes is a collection of automated gene family analysis pipelines for comparative plant genomics☆38Updated 2 years ago
- Data analysis of Funannotate and Orthofinder outputs to Pangenome results☆23Updated 5 years ago
- scripts☆20Updated 7 years ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆56Updated last month
- use long sequenced reads to close gaps in assemblies☆39Updated 7 years ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 3 years ago
- BITACORA: A Bioinformatics tool for gene family annotation☆51Updated last week
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆57Updated 2 years ago
- A software to assemble chloroplast and mitochodrial genomes using PacBio data☆40Updated 5 years ago
- ☆34Updated 4 years ago
- LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome sequences.☆51Updated last year
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- Accompanying repository for our publications on manual curation methods for Transposable Elements.☆21Updated last year
- Pan-genome Construction and Population Structure Variation Calling pipeline☆44Updated last year
- Tutorial about R package PopGenome☆44Updated 6 years ago
- Automated de novo assembly of whole chloroplast genomes.☆47Updated last year
- ☆41Updated 2 years ago
- Useful bioinformatic scripts☆58Updated last year
- A program to call variants from genome alignment☆81Updated 7 months ago
- Phylogenomics from Low-coverage Whole-genome Sequencing☆39Updated 5 years ago
- TSEBRA: Transcript Selector for BRAKER☆49Updated last month
- ☆45Updated 9 years ago
- Calculate circos format data of GC content and GC skew from genome data.☆12Updated 2 months ago
- A simple program for evaluate the assembly of a give genome.☆18Updated 2 years ago
- Synteny Imager☆65Updated last month
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆59Updated 2 years ago
- ☆77Updated 6 years ago
- Plant genome assembly and annotation pipeline using snakemake☆50Updated 7 months ago