Alternatives and similar repositories for helpful_commands

Users that are interested in helpful_commands are comparing it to the libraries listed below

• paulstothard / helpful_links
  Links to resources related to bioinformatics and data analysis.
  ☆27Updated last week
• harvardinformatics / GenomeAnnotation
  Best practices and workflow for genome annotation
  ☆79Updated 8 months ago
• bpucker / teaching
  This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.
  ☆55Updated 3 weeks ago
• enormandeau / Scripts
  Collection of various scripts
  ☆80Updated last month
• lskatz / awesome-bioinformatics-education
  resources for bioinformatics education
  ☆100Updated 7 months ago
• shenwei356 / perfect-bioinformatic-tools
  What should perfect bioinformatic tools be like?
  ☆143Updated 2 months ago
• lskatz / awesome-bioinformatics-jobs
  Resources for bioinformatics jobs
  ☆52Updated 6 months ago
• epi2me-labs / wf-metagenomics
  Metagenomic classification of long-read sequencing data
  ☆97Updated last month
• wrf / genomeGTFtools
  convert various features into a GFF-like file for use in genome browsers
  ☆72Updated last month
• Juke34 / awesome-awesomeness-bioinformatics
  A list of awesome awesomeness related to bioinformatics and associated fields
  ☆42Updated 9 months ago
• mritchielab / long_read_tools
  A catalogue of available long read sequencing data analysis tools
  ☆83Updated this week
• vappiah / bacterial-genomics-tutorial
  ☆62Updated last year
• JLSteenwyk / ClipKIT
  a multiple sequence alignment-trimming algorithm for accurate phylogenomic inference
  ☆81Updated 2 months ago
• DessimozLab / read2tree
  a tool for inferring species tree from sequencing reads
  ☆156Updated last month
• AstrobioMike / bit
  Bioinformatics Tools
  ☆90Updated last week
• nf-core / funcscan
  (Meta-)genome screening for functional and natural product gene sequences
  ☆99Updated 3 weeks ago
• nadegeguiglielmoni / genome_assembly_tools
  List of genome assembly tools
  ☆89Updated last week
• HadrienG / tutorials
  Various bioinformatics tutorials
  ☆62Updated 2 years ago
• genotoul-bioinfo / dgenies
  Dotplot large Genomes in an Interactive, Efficient and Simple way
  ☆110Updated 3 weeks ago
• sagnikbanerjee15 / Finder
  A fully automated gene annotator from RNA-Seq expression data
  ☆61Updated 2 years ago
• moiexpositoalonsolab / grenepipe
  A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles - fo…
  ☆111Updated 6 months ago
• grimmlab / MicrobiomeBestPracticeReview
  Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing
  ☆123Updated last year
• wdecoster / nanostat
  Create statistic summary of an Oxford Nanopore read dataset
  ☆128Updated 3 years ago
• ZhihaoXie / awesome-bioinformatics-tools
  A curated list of awesome Bioinformatics software, tools and resources
  ☆30Updated 6 years ago
• enasequence / enaBrowserTools
  A collection of scripts to assist in the retrieval of data from the ENA Browser
  ☆92Updated 5 months ago
• DessimozLab / FastOMA
  FastOMA is a scalable software package to infer orthology relationship.
  ☆86Updated last week
• sanger-pathogens / pathogen-informatics-training
  ☆75Updated 5 years ago
• metagenlab / mummer2circos
  Circular bacterial genome plots based on BLAST or NUCMER/PROMER alignments
  ☆106Updated 2 years ago
• fmalmeida / bacannot
  Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.
  ☆105Updated last month
• NAL-i5K / GFF3toolkit
  Python programs for processing GFF3 files
  ☆102Updated 3 weeks ago