☆56Jan 15, 2026Updated 9 months ago
Alternatives and similar repositories for LP_2021
Users that are interested in LP_2021 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repository for the paper "The impact of package selection and versioning on single-cell RNA-seq analysis"☆21Nov 27, 2025Updated 11 months ago
- ☆20May 1, 2023Updated 3 years ago
- ☆10Oct 7, 2024Updated 2 years ago
- ☆16Mar 24, 2026Updated 7 months ago
- ☆30Jan 4, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆12Oct 28, 2025Updated last year
- ☆14Updated this week
- A Python toolkit for subcellular analysis of spatial transcriptomics data☆88Oct 26, 2026Updated last week
- ☆23May 21, 2026Updated 5 months ago
- DNA and RNA variant calling pipelines with HLA typing and Neoantigen predictions☆12Jul 8, 2021Updated 5 years ago
- Python tool for alignment of spatial transcriptomics (ST) data using diffeomorphic metric mapping☆116Oct 16, 2026Updated 2 weeks ago
- ☆17Apr 15, 2025Updated last year
- ☆23Dec 23, 2024Updated last year
- Background subtraction for COMET platform☆14May 12, 2026Updated 5 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Reference mapping for single-cell genomics☆414Jun 26, 2026Updated 4 months ago
- Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods☆100Mar 18, 2023Updated 3 years ago
- "Orchestrating Spatial Transcriptomics Analysis with Bioconductor" (OSTA) online book☆119Oct 17, 2026Updated 2 weeks ago
- ☆12Aug 30, 2024Updated 2 years ago
- Analysis of Single Cell Expression, Normalization and Differential expression☆14Feb 29, 2020Updated 6 years ago
- ☆30Oct 4, 2024Updated 2 years ago
- Analysis of smFISH data☆12Aug 27, 2018Updated 8 years ago
- A pipeline to transform images into valuable analysis items☆19Sep 21, 2026Updated last month
- A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data☆14Oct 21, 2024Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Dimensionality-reduction and classification for morphology and electrophysiology☆12Sep 23, 2024Updated 2 years ago
- ☆28Jan 25, 2022Updated 4 years ago
- Reproducing result from the paper☆34May 12, 2021Updated 5 years ago
- Predict RNA velocity through deep learning☆74Dec 12, 2023Updated 2 years ago
- Spatial One☆32Oct 31, 2024Updated 2 years ago
- Cell cycle analysis of single-cell proteomic and transcriptomic data for the FUCCI cell model☆15Oct 19, 2023Updated 3 years ago
- Spatial-eXpression-R: Cell type identification (including cell type mixtures) and cell type-specific differential expression for spatial …☆492Jan 22, 2026Updated 9 months ago
- Compute the neighborhood consolidation matrix and identify SHRs☆15Jun 12, 2025Updated last year
- Tutorial Website☆68Feb 1, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆14Jun 15, 2024Updated 2 years ago
- ☆17Sep 13, 2024Updated 2 years ago
- DeepCell Kiosk Distribution for Kubernetes on GKE and AWS☆39Jul 12, 2023Updated 3 years ago
- ☆37Feb 1, 2022Updated 4 years ago
- Code for reproducing results from the paper "RNA velocity and protein acceleration from single-cell multiomics experiments."☆11Feb 1, 2020Updated 6 years ago
- Raman2RNA code base.☆16Sep 8, 2023Updated 3 years ago
- Bayesian model for clustering and enhancing the resolution of spatial gene expression experiments.☆191Jan 8, 2026Updated 9 months ago