Alternatives and similar repositories for UniprotR

Users that are interested in UniprotR are comparing it to the libraries listed below

• jpquast / protti
  Picotti lab data analysis package.
  ☆64Updated 7 months ago
• jpquast / ggplate
  Create Layout Plots of Biological Culture Plates and Microplates
  ☆102Updated last year
• tidymass / tidymass
  tidymass
  ☆58Updated last month
• MonashBioinformaticsPlatform / LFQ-Analyst
  The repo for LFQ-Analyst
  ☆30Updated last year
• YuLab-SMU / ggmsa
  Visualizing publication-quality multiple sequence alignment using ggplot2
  ☆217Updated 2 weeks ago
• fgcz / prolfqua
  Differential Expression Analysis tool box R lang package for omics data
  ☆46Updated last week
• evanpeikon / functional_enrichment_analysis
  A DIY guide to gene ontology, pathway, and gene set enrichment analysis
  ☆26Updated last year
• lgatto / RforProteomics
  Using R and Bioconductor packages for the analysis and comprehension of proteomics data.
  ☆98Updated 2 months ago
• brennanpincardiff / drawProteins
  Creating package to draw proteins from Uniprot API
  ☆35Updated last year
• Vitek-Lab / MSstats
  R package - MSstats
  ☆87Updated last month
• statOmics / MSqRob
  Robust statistical inference for quantitative LC-MS proteomics
  ☆34Updated 2 years ago
• bartongroup / Proteus
  R package for analysing proteomics data
  ☆50Updated 2 years ago
• Vitek-Lab / MSstatsShiny
  R-Shiny GUI integrated with the MSstats package family
  ☆17Updated last week
• uc-bd2k / GREIN
  GREIN : GEO RNA-seq Experiments Interactive Navigator
  ☆50Updated 6 years ago
• dosorio / Peptides
  An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.
  ☆93Updated last year
• ftwkoopmans / msdap
  MS-DAP: downstream analysis pipeline for quantitative proteomics
  ☆39Updated 8 months ago
• databio2022 / GraphBio
  GraphBio: a shiny web app to easily perform popular visualization analysis for omics data
  ☆33Updated 2 years ago
• jorainer / metabolomics2018
  Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.
  ☆27Updated 2 years ago
• ssayols / rrvgo
  Reduce + Visualize Gene Ontology
  ☆34Updated 3 months ago
• jeffsocal / tidyproteomics
  An S3 data object and framework for common quantitative proteomic analyses
  ☆47Updated 5 months ago
• sneumann / mzR
  This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data…
  ☆46Updated 2 months ago
• nickhir / GermlineMutationCalling
  An adaptable Snakemake workflow which uses GATKs best practice recommendations to perform germline mutation calling starting with BAM fil…
  ☆11Updated 4 years ago
• jessegmeyerlab / proteomics-tutorial
  ☆66Updated last year
• saezlab / cosmosR
  COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…
  ☆63Updated last month
• yafeng / DEqMS
  DEqMS is a tool for quantitative proteomic analysis
  ☆24Updated 7 months ago
• immunitastx / coding_exercise_TCGA_infiltration
  coding exercise using TCGA immune infiltration data
  ☆46Updated last year
• crazyhottommy / reproduce_genomics_paper_figures
  step by step tutorial in the website
  ☆28Updated 8 months ago
• cbielow / PTXQC
  A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant
  ☆47Updated 4 months ago
• nf-core / quantms
  Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…
  ☆36Updated last year
• pmartR / pmartR
  The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of ma…
  ☆47Updated 3 weeks ago