Alternatives and similar repositories for MetaboDiff

Users that are interested in MetaboDiff are comparing it to the libraries listed below

• datapplab / pathview
  pathway based data integration and visualization
  ☆43Updated 9 months ago
• s-andrews / sradownloader
  A script to make downloading of SRA/GEO data easier
  ☆33Updated 2 years ago
• schatzlab / scikit-ribo
  Accurate estimation and robust modelling of translation dynamics at codon resolution
  ☆22Updated 8 years ago
• atc3 / maxquant_linux_guide
  A guide to running MaxQuant in Linux
  ☆35Updated 5 years ago
• djhn75 / RNAEditor
  ☆15Updated 3 years ago
• drpowell / degust
  An interactive web-tool for RNA-seq analysis
  ☆70Updated last month
• SegataLab / hclust2
  Hclust2 is a handy tool for plotting heat-maps with several useful options to produce high quality figures that can be used in publicatio…
  ☆12Updated 3 years ago
• wyguo / ThreeDRNAseq
  A pipeline for differential expression and differential alternative splicing analysis
  ☆66Updated last year
• TrinityCTAT / CTAT-VirusIntegrationFinder
  ☆17Updated 5 months ago
• apcamargo / tspex
  tspex: tissue-specificity calculator
  ☆36Updated 2 years ago
• mdozmorov / RNA-seq_notes
  A continually expanding collection of RNA-seq tools
  ☆53Updated 3 months ago
• sk-sahu / sig-bio-shiny
  A standalone interactive application for detecting biological significance on a set of genes
  ☆40Updated 4 years ago
• costasilvati / consexpression
  Tool for RNA-Seq analysis.
  ☆39Updated 3 years ago
• YuLab-SMU / MicrobiomeProfiler
  A shiny package for microbiome functional enrichment analysis
  ☆38Updated 3 weeks ago
• Kumquatum / GWENA
  Gene Co-expression Network analysis pipeline
  ☆25Updated 2 years ago
• abodein / timeOmics
  Time-Course Multi-Omics data integration
  ☆26Updated last year
• nf-core / diaproteomics
  Automated quantitative analysis of DIA proteomics mass spectrometry measurements.
  ☆21Updated last year
• crazyhottommy / pyflow-RNAseq
  RNAseq pipeline based on snakemake
  ☆26Updated 2 years ago
• NBISweden / GUESSmyLT
  An efficient way to guess the library type of your RNA-Seq data.
  ☆33Updated 3 years ago
• JSB-UCLA / Clipper
  A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions
  ☆41Updated 3 years ago
• ben-laufer / CpG_Me
  A whole genome bisulfite sequencing (WGBS) pipeline for the alignment and QC of DNA methylation that goes from from raw reads (FastQ) to …
  ☆24Updated 3 years ago
• mani2012 / BatchQC
  Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.
  ☆35Updated 2 years ago
• ulelab / ultraplex
  Ultra-fast 5' and 3' demultiplexer
  ☆28Updated last year
• frattalab / splicing
  Snakemake pipeline for running MAJIQ
  ☆23Updated 2 years ago
• nf-core / dualrnaseq
  Analysis of Dual RNA-seq data - an experimental method for interrogating host-pathogen interactions through simultaneous RNA-seq.
  ☆24Updated 6 months ago
• griffithlab / genviz.org
  Genomic data interpretation and visualization Workshop
  ☆21Updated 2 months ago
• jianhong / trackViewer.documentation
  documentation for trackViewer
  ☆29Updated 6 years ago
• databio2022 / GraphBio
  GraphBio: a shiny web app to easily perform popular visualization analysis for omics data
  ☆33Updated 2 years ago
• stephenturner / mergelanes
  Merge fastq files split over lanes
  ☆20Updated 7 years ago
• cccnrc / plot-VCF
  visual analysis of your VCF files
  ☆38Updated 3 years ago