Alternatives and similar repositories for MetaboAnalyst_Docker:

Users that are interested in MetaboAnalyst_Docker are comparing it to the libraries listed below

• jorainer / metabolomics2018
  Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.
  ☆27Updated last year
• jaspershen / metID
  Construct database and identify metabolites.
  ☆5Updated 2 years ago
• tidymass / tidymass
  tidymass
  ☆54Updated last year
• yafeng / DEqMS
  DEqMS is a tool for quantitative proteomic analysis
  ☆23Updated last week
• bartongroup / Proteus
  R package for analysing proteomics data
  ☆49Updated 2 years ago
• atc3 / maxquant_linux_guide
  A guide to running MaxQuant in Linux
  ☆32Updated 5 years ago
• jaspershen / MetNormalizer
  MetNormalizer is used to normalize large scale metabolomics data.
  ☆21Updated 4 years ago
• RASpicer / MetabolomicsTools
  ☆55Updated 4 years ago
• shuzhao-li-lab / espol-workshop
  5-day workshop on Metabolomics and Data Analysis
  ☆16Updated 5 years ago
• nf-core / metaboigniter
  Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.
  ☆21Updated 2 months ago
• shuzhao-li / mummichog
  pathway and network analysis for metabolomics
  ☆40Updated 10 months ago
• andreasmock / MetaboDiff
  ☆30Updated 4 years ago
• kentsisresearchgroup / UltraQuant
  MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters
  ☆26Updated 6 years ago
• evocellnet / funscoR
  R package for functionally scoring phosphorylation sites
  ☆19Updated 5 years ago
• statOmics / MSqRob
  Robust statistical inference for quantitative LC-MS proteomics
  ☆33Updated 2 years ago
• pFindStudio / pFind3
  ☆26Updated 2 months ago
• nf-core / quantms
  Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…
  ☆33Updated 11 months ago
• LiChenPU / NetID
  A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery
  ☆46Updated last year
• lehtiolab / proteogenomics-analysis-workflow
  IPAW: a Nextflow workflow for proteogenomics
  ☆27Updated 8 months ago
• xia-lab / OptiLCMS
  R package for optimized LC-MS spectra processing
  ☆25Updated this week
• singha53-zz / diablo
  DIABLO - an integrative multi-group, multi-dataset classification method
  ☆22Updated 6 years ago
• dnusinow / cRomppass
  Score an Affinity Purification Mass Spectrometry Proteomics Experiment for Interactor Confidence
  ☆10Updated 9 years ago
• bigbio / ibaqpy
  Absolute quantification package based on quantms.io
  ☆13Updated 2 months ago
• fgcz / prolfqua
  Differential Expression Analysis tool box R lang package for omics data
  ☆44Updated 3 weeks ago
• const-ae / proDA
  Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/
  ☆19Updated last year
• saezlab / cosmosR
  COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…
  ☆61Updated last month
• uc-bd2k / GREIN
  GREIN : GEO RNA-seq Experiments Interactive Navigator
  ☆49Updated 5 years ago
• MonashBioinformaticsPlatform / LFQ-Analyst
  The repo for LFQ-Analyst
  ☆30Updated 8 months ago
• nf-core / diaproteomics
  Automated quantitative analysis of DIA proteomics mass spectrometry measurements.
  ☆18Updated 3 months ago
• Biobix / proteoformer
  Integration ribosome profiling - mass spectrometry
  ☆14Updated last month