xia-lab / MetaboAnalyst_Docker
Docker for MetaboAnalyst 4.0
☆23Updated 4 years ago
Alternatives and similar repositories for MetaboAnalyst_Docker:
Users that are interested in MetaboAnalyst_Docker are comparing it to the libraries listed below
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆26Updated last year
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆59Updated 6 months ago
- DEqMS is a tool for quantitative proteomic analysis☆22Updated last month
- tidymass☆54Updated last year
- Construct database and identify metabolites.☆4Updated 2 years ago
- R package for analysing proteomics data☆49Updated last year
- ☆26Updated this week
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆45Updated last year
- Chemical Similarity Enrichment analysis of metabolomics datasets☆27Updated 6 months ago
- ☆55Updated 3 years ago
- 5-day workshop on Metabolomics and Data Analysis☆16Updated 5 years ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆17Updated this week
- Quantitative features for mass spectrometry data☆26Updated this week
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆26Updated 6 years ago
- metaX: a flexible and comprehensive software for processing omics data.☆24Updated last year
- DIABLO - an integrative multi-group, multi-dataset classification method☆21Updated 5 years ago
- A guide to running MaxQuant in Linux☆32Updated 4 years ago
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆33Updated 8 months ago
- Integration ribosome profiling - mass spectrometry☆14Updated last month
- ☆31Updated 3 weeks ago
- MetNormalizer is used to normalize large scale metabolomics data.☆20Updated 3 years ago
- R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …☆28Updated 2 months ago
- ☆17Updated last month
- ☆30Updated 4 years ago
- Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/☆18Updated last year
- The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.☆33Updated 3 years ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆48Updated 5 years ago
- Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.☆22Updated 3 months ago
- ☆11Updated 3 years ago
- IPAW: a Nextflow workflow for proteogenomics☆25Updated 5 months ago