oxpig / ABlooperLinks
Tool for modelling the CDRs of antibodies
☆50Updated 2 years ago
Alternatives and similar repositories for ABlooper
Users that are interested in ABlooper are comparing it to the libraries listed below
Sorting:
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- ☆51Updated 2 years ago
- ☆47Updated 11 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆86Updated 3 weeks ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Updated 3 weeks ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆70Updated last year
- ☆41Updated 4 months ago
- Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"☆31Updated 3 years ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆76Updated 2 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆69Updated 5 months ago
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆23Updated last year
- ☆114Updated 3 years ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆56Updated 5 months ago
- Extension of ThermoMPNN for double mutant predictions☆50Updated 2 months ago
- ☆88Updated last year
- ☆43Updated 8 months ago
- AlphaBind code + model accompanying pre-print☆87Updated 5 months ago
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- ☆73Updated last year
- ☆73Updated 5 years ago
- ☆93Updated 2 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆131Updated last month
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆97Updated 6 months ago
- ☆72Updated 9 months ago
- AlphaFold-initiated replica exchange protein docking☆86Updated 6 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆57Updated 7 months ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆49Updated last year
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆80Updated 4 months ago
- ☆46Updated last year
- An open-source deep learning framework for data mining of protein-protein interfaces or single-residue variants.☆56Updated last year