wengong-jin / RefineGNNLinks
☆130Updated 3 years ago
Alternatives and similar repositories for RefineGNN
Users that are interested in RefineGNN are comparing it to the libraries listed below
Sorting:
- ☆107Updated 2 years ago
- open source repository☆143Updated last year
- Geometric Vector Perceptron --- a rotation-equivariant GNN for learning from biomolecular structure☆158Updated 4 years ago
- ☆205Updated last year
- Open source code for TankBind. Galixir Tenchnologies☆170Updated 2 years ago
- ☆228Updated 2 years ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆121Updated 8 months ago
- Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)☆223Updated last year
- ☆133Updated 5 months ago
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆110Updated 2 years ago
- Geometric Vector Perceptrons --- a rotation-equivariant GNN for learning from biomolecular structure☆308Updated this week
- An awesome & curated list of docking papers☆118Updated 8 months ago
- Generative Language Modeling for Antibody Design☆172Updated last year
- [NeurIPS 2023] DrugCLIP: Contrastive Protein-Molecule Representation Learning for Virtual Screening☆116Updated last year
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆108Updated last year
- LM-GVP: A Generalizable Deep Learning Framework for Protein Property Prediction from Sequence and Structure☆64Updated last year
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆349Updated 2 years ago
- Database of Interacting Protein Structures (DIPS)☆102Updated last year
- Generative Models for Graph-Based Protein Design☆280Updated 4 years ago
- source code for https://arxiv.org/abs/2005.11248 "Accelerating Antimicrobial Discovery with Controllable Deep Generative Models and Molec…☆106Updated 2 months ago
- Antibody-Antigen Docking and Affinity Benchmark☆73Updated 5 years ago
- Papers about Structure-based Drug Design (SBDD)☆132Updated 2 months ago
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆99Updated 2 years ago
- 💊 A 3D Generative Model for Structure-Based Drug Design (NeurIPS 2021)☆200Updated 2 years ago
- PEER Benchmark, appear at NeurIPS 2022 Dataset and Benchmark Track (https://arxiv.org/abs/2206.02096)☆98Updated 2 years ago
- ☆95Updated last year
- PocketGen (Nature Machine Intelligence 24): Generating Full-Atom Ligand-Binding Protein Pockets☆202Updated 7 months ago
- ☆63Updated 5 months ago
- EquiDock: geometric deep learning for fast rigid 3D protein-protein docking☆250Updated 2 years ago
- a novel DTA predition method using graph neural network☆76Updated 2 years ago