wengong-jin / RefineGNNLinks
☆130Updated 3 years ago
Alternatives and similar repositories for RefineGNN
Users that are interested in RefineGNN are comparing it to the libraries listed below
Sorting:
- ☆107Updated 2 years ago
- open source repository☆143Updated last year
- ☆204Updated last year
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆120Updated 8 months ago
- Generative Language Modeling for Antibody Design☆170Updated last year
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆107Updated last year
- Geometric Vector Perceptron --- a rotation-equivariant GNN for learning from biomolecular structure☆155Updated 4 years ago
- Open source code for TankBind. Galixir Tenchnologies☆170Updated last year
- ☆228Updated 2 years ago
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆110Updated 2 years ago
- Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)☆219Updated last year
- ☆133Updated 4 months ago
- An awesome & curated list of docking papers☆117Updated 7 months ago
- [NeurIPS 2023] DrugCLIP: Contrastive Protein-Molecule Representation Learning for Virtual Screening☆114Updated last year
- Antibody-Antigen Docking and Affinity Benchmark☆73Updated 4 years ago
- Database of Interacting Protein Structures (DIPS)☆102Updated last year
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆97Updated 2 years ago
- LM-GVP: A Generalizable Deep Learning Framework for Protein Property Prediction from Sequence and Structure☆64Updated last year
- EquiDock: geometric deep learning for fast rigid 3D protein-protein docking☆250Updated 2 years ago
- Geometric Vector Perceptrons --- a rotation-equivariant GNN for learning from biomolecular structure☆307Updated 2 years ago
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆347Updated 2 years ago
- Papers about Structure-based Drug Design (SBDD)☆127Updated last month
- The Enhanced Database of Interacting Protein Structures for Interface Prediction☆50Updated 2 months ago
- PEER Benchmark, appear at NeurIPS 2022 Dataset and Benchmark Track (https://arxiv.org/abs/2206.02096)☆96Updated 2 years ago
- ☆94Updated last year
- Official Implementation of IgGM☆148Updated last week
- source code for https://arxiv.org/abs/2005.11248 "Accelerating Antimicrobial Discovery with Controllable Deep Generative Models and Molec…☆106Updated last month
- Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models …☆254Updated 6 months ago
- ☆121Updated 4 months ago
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆59Updated last year