☆77Sep 2, 2020Updated 6 years ago
Alternatives and similar repositories for DMS_opt
Users that are interested in DMS_opt are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆23Jun 24, 2022Updated 4 years ago
- Unconstrained lattice antibody-antigen bindings generator☆114May 23, 2026Updated 5 months ago
- Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.☆173Nov 30, 2022Updated 3 years ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Oct 27, 2021Updated 5 years ago
- open source repository☆149Nov 30, 2023Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆438Sep 9, 2026Updated last month
- BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…☆268May 13, 2025Updated last year
- ☆94Sep 7, 2022Updated 4 years ago
- PyTorch code for KDD 2023 paper "Pre-training Antibody Language Models for Antigen-Specific Computational Antibody Design"☆56Nov 14, 2023Updated 2 years ago
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆24Jul 9, 2024Updated 2 years ago
- ☆23Jul 4, 2021Updated 5 years ago
- Quantifying the nativeness of antibody sequences using long short-term memory networks☆18Dec 17, 2021Updated 4 years ago
- Tool for modelling the CDRs of antibodies☆52Jan 19, 2023Updated 3 years ago
- Generative Language Modeling for Antibody Design☆201Jul 20, 2026Updated 3 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Code for "A Deep Learning Framework for Flexible Docking and Design"☆17Sep 29, 2022Updated 4 years ago
- ☆32Jul 22, 2020Updated 6 years ago
- ☆133Sep 5, 2022Updated 4 years ago
- AbLang: A language model for antibodies☆173Sep 22, 2023Updated 3 years ago
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆370Jun 29, 2023Updated 3 years ago
- ☆36Nov 4, 2021Updated 4 years ago
- ☆145Aug 8, 2024Updated 2 years ago
- test☆14Nov 13, 2020Updated 5 years ago
- Efficient evolution from protein language models☆229Aug 26, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆38Nov 7, 2024Updated last year
- Antibody-Antigen Docking and Affinity Benchmark☆78Nov 17, 2020Updated 5 years ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆135Feb 26, 2025Updated last year
- The code used to generate the results from Parkinson / Hard et al. 2022☆17Jun 27, 2025Updated last year
- ☆221Sep 24, 2024Updated 2 years ago
- Predict the structure of immune receptor proteins☆195Nov 11, 2025Updated 11 months ago
- ☆27Dec 6, 2022Updated 3 years ago
- Help file for running the scripts to learn and evaluate graph convolution networks for epitope and paratope prediction☆35Jun 8, 2020Updated 6 years ago
- Machine learning-driven antibody design☆66Jul 5, 2023Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability☆16Sep 8, 2023Updated 3 years ago
- ☆144Jun 3, 2025Updated last year
- SLIP is a sandbox environment for engineering protein sequences with synthetic fitness functions.☆20Updated this week
- ☆19Oct 4, 2022Updated 4 years ago
- Official Implementation of IgGM☆237May 28, 2026Updated 5 months ago
- Code used in the manuscript for De Novo Design of Bioactive Protein Switches☆17May 16, 2019Updated 7 years ago
- Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"☆30Oct 28, 2022Updated 4 years ago