Public repository describing training and testing of AntiBERTa.
☆61Apr 14, 2023Updated 2 years ago
Alternatives and similar repositories for antiberta
Users that are interested in antiberta are comparing it to the libraries listed below
Sorting:
- Tool for modelling the CDRs of antibodies☆50Jan 19, 2023Updated 3 years ago
- Antibody-specific masked language model☆68Jul 16, 2023Updated 2 years ago
- AbLang: A language model for antibodies☆158Sep 22, 2023Updated 2 years ago
- Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.☆170Nov 30, 2022Updated 3 years ago
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆406Sep 3, 2023Updated 2 years ago
- Generative Language Modeling for Antibody Design☆183Oct 5, 2024Updated last year
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Mar 18, 2023Updated 2 years ago
- open source repository☆146Nov 30, 2023Updated 2 years ago
- An antibody-specific language model focusing on NGL prediction☆25Mar 8, 2025Updated 11 months ago
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated 9 months ago
- ☆51Aug 21, 2023Updated 2 years ago
- Predict the structure of immune receptor proteins☆171Nov 11, 2025Updated 3 months ago
- BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…☆226May 13, 2025Updated 9 months ago
- Quantifying the nativeness of antibody sequences using long short-term memory networks☆18Dec 17, 2021Updated 4 years ago
- Predict the structure of immune receptor proteins☆59Nov 8, 2024Updated last year
- Convenience Python APIs for antibody numbering using ANARCI☆117May 19, 2025Updated 9 months ago
- ☆23Jun 24, 2022Updated 3 years ago
- ☆130Sep 5, 2022Updated 3 years ago
- A variational autoencoder that directly generates the 3D coordinates of immunoglobulin protein backbones.☆32Jul 25, 2022Updated 3 years ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆125Feb 26, 2025Updated last year
- ☆28Dec 6, 2022Updated 3 years ago
- Tool for modelling the CDRs of antibodies☆34Nov 10, 2022Updated 3 years ago
- ☆76Oct 23, 2024Updated last year
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆91Jun 11, 2025Updated 8 months ago
- Code for 'On Pre-trained Language Models For Antibody'☆32Feb 1, 2023Updated 3 years ago
- PyTorch implementation of Parapred (Liberis et al., 2018) with Paratyping (Richardson et al., 2021)☆20Aug 20, 2023Updated 2 years ago
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆354Jun 29, 2023Updated 2 years ago
- Improved antibody structure-based design using inverse folding☆153Dec 9, 2025Updated 2 months ago
- An antibody-specific language model focusing on NGL prediction☆36Aug 22, 2024Updated last year
- The MULTICOM4 protein structure prediction system developed by the Bioinformatics and Machine Learning Lab at the University of Missouri …☆17Nov 27, 2025Updated 3 months ago
- Python interface to cd-hit☆10Feb 26, 2019Updated 7 years ago
- Versatile human antibody sequence design☆22May 27, 2025Updated 9 months ago
- ☆56Sep 12, 2025Updated 5 months ago
- AntiRef: reference clusters of human antibody sequences☆12Apr 18, 2024Updated last year
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆31Jul 8, 2024Updated last year
- ☆91Sep 7, 2022Updated 3 years ago
- Unconstrained lattice antibody-antigen bindings generator☆111Nov 16, 2025Updated 3 months ago
- Fitness landscapes for antibodies☆153Dec 23, 2025Updated 2 months ago
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆103Apr 7, 2023Updated 2 years ago