Alternatives and similar repositories for antiberta:

Users that are interested in antiberta are comparing it to the libraries listed below

• prihoda / AbNumber
  Convenience Python APIs for antibody numbering using ANARCI
  ☆95Updated 3 months ago
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆68Updated 3 months ago
• dahjan / DMS_opt
  ☆68Updated 4 years ago
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆62Updated 3 years ago
• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆36Updated 2 years ago
• jeffreyruffolo / AntiBERTy
  Antibody-specific masked language model
  ☆53Updated last year
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆47Updated 2 years ago
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆30Updated 2 weeks ago
• oxpig / SPACE2
  Tool for rapid clustering of antibody models by the structure of their CDRs.
  ☆20Updated 6 months ago
• dina-lab3D / NanoNet
  ☆45Updated last year
• hugohrban / ProGen2-finetuning
  Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.
  ☆57Updated 3 months ago
• marcellszi / rna3db
  A dataset for training and benchmarking deep learning models for RNA structure prediction
  ☆50Updated 4 months ago
• oxpig / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆133Updated 3 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated last month
• Fleishman-Lab / CUMAb
  ☆19Updated 3 weeks ago
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆115Updated last week
• vamships / PECAN
  Help file for running the scripts to learn and evaluate graph convolution networks for epitope and paratope prediction
  ☆34Updated 4 years ago
• gv20-therapeutics / antibody-in-pytorch
  Machine learning models for antibody sequences in PyTorch
  ☆39Updated 3 years ago
• aqlaboratory / rgn2
  ☆106Updated last year
• robpearc / DeepFoldRNA
  ☆35Updated last year
• A-Alpha-Bio / alphabind
  AlphaBind code + model accompanying pre-print
  ☆52Updated 4 months ago
• TencentAI4S / tfold
  open source code for Tencent tFold
  ☆97Updated last month
• hefeda / design_tools
  A compilation of deep learning methods for protein design
  ☆97Updated 2 years ago
• uci-cbcl / esm-efficient
  Efficient implementatin of ESM family.
  ☆55Updated 3 months ago
• OpenProteinAI / PoET
  Inference code for PoET: A generative model of protein families as sequences-of-sequences
  ☆71Updated last year
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆56Updated last year
• Graylab / AlphaRED
  AlphaFold-initiated replica exchange protein docking
  ☆79Updated last month
• AbSciBio / igdesign
  ☆38Updated 3 months ago
• Liuxg16 / GeoPPI
  ☆86Updated 2 years ago
• Graylab / IgLM
  Generative Language Modeling for Antibody Design
  ☆148Updated 7 months ago