Alternatives and similar repositories for antiberta

Users that are interested in antiberta are comparing it to the libraries listed below

• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆73Updated 5 months ago
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆64Updated 3 years ago
• dahjan / DMS_opt
  ☆68Updated 4 years ago
• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆37Updated 2 years ago
• prihoda / AbNumber
  Convenience Python APIs for antibody numbering using ANARCI
  ☆96Updated last month
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆48Updated 2 years ago
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆31Updated 2 months ago
• oxpig / SPACE2
  Tool for rapid clustering of antibody models by the structure of their CDRs.
  ☆20Updated 7 months ago
• hugohrban / ProGen2-finetuning
  Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.
  ☆60Updated 4 months ago
• vamships / PECAN
  Help file for running the scripts to learn and evaluate graph convolution networks for epitope and paratope prediction
  ☆34Updated 5 years ago
• OpenProteinAI / PoET
  Inference code for PoET: A generative model of protein families as sequences-of-sequences
  ☆75Updated last year
• jeffreyruffolo / AntiBERTy
  Antibody-specific masked language model
  ☆55Updated last year
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆126Updated last month
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 2 months ago
• oxpig / dlab-public
  Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"
  ☆31Updated 2 years ago
• oxpig / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆141Updated 4 months ago
• AbSciBio / igdesign
  ☆41Updated 5 months ago
• alchemab / parapred-pytorch
  PyTorch implementation of Parapred (Liberis et al., 2018) with Paratyping (Richardson et al., 2021)
  ☆20Updated last year
• uci-cbcl / esm-efficient
  Efficient implementatin of ESM family.
  ☆56Updated 4 months ago
• dina-lab3D / NanoNet
  ☆46Updated last year
• marcellszi / rna3db
  A dataset for training and benchmarking deep learning models for RNA structure prediction
  ☆56Updated 6 months ago
• gv20-therapeutics / antibody-in-pytorch
  Machine learning models for antibody sequences in PyTorch
  ☆39Updated 4 years ago
• pylelab / rMSA
  RNA Multiple Sequence Alignment
  ☆42Updated last year
• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆71Updated 4 years ago
• robpearc / DeepFoldRNA
  ☆35Updated last year
• piercelab / tcrmodel2
  ☆41Updated 2 months ago
• Fleishman-Lab / CUMAb
  ☆19Updated 2 months ago
• TencentAI4S / tfold
  open source code for Tencent tFold
  ☆101Updated 3 months ago
• oxpig / PLAbDab
  The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…
  ☆25Updated 11 months ago
• wenjiegroup / ProMEP
  Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning
  ☆62Updated last year