Alternatives and similar repositories for Paragraph:

Users that are interested in Paragraph are comparing it to the libraries listed below

• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆60Updated last month
• oxpig / PLAbDab
  The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…
  ☆23Updated 7 months ago
• oxpig / kasearch
  KA-Search: Rapid and exhaustive sequence identity search of known antibodies
  ☆22Updated 7 months ago
• jeffreyruffolo / AntiBERTy
  Antibody-specific masked language model
  ☆47Updated last year
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆27Updated last month
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆47Updated 2 years ago
• Fleishman-Lab / CUMAb
  ☆19Updated 8 months ago
• dina-lab3D / NanoNet
  ☆45Updated last year
• dahjan / DMS_opt
  ☆68Updated 4 years ago
• vamships / PECAN
  Help file for running the scripts to learn and evaluate graph convolution networks for epitope and paratope prediction
  ☆32Updated 4 years ago
• oxpig / dlab-public
  Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"
  ☆31Updated 2 years ago
• Kuhlman-Lab / evopro
  ☆72Updated last week
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆48Updated this week
• FTD007 / PInet
  ☆25Updated 3 years ago
• alchemab / antiberta
  Public repository describing training and testing of AntiBERTa.
  ☆57Updated last year
• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆69Updated 4 years ago
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆36Updated 2 months ago
• ELELAB / RosettaDDGPrediction
  ☆61Updated last week
• oxpig / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆24Updated 5 months ago
• pfizer-opensource / pfabnet-viscosity
  ☆13Updated 2 years ago
• sokrypton / af2bind
  ☆46Updated last week
• stebliankin / piston
  Evaluating Protein Binding Interfaces with Transformer Networks
  ☆41Updated last year
• Tessier-Lab-UMich / Emi_Pareto_Opt_ML
  ☆20Updated 2 years ago
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆21Updated last year
• oxpig / SPACE2
  Tool for rapid clustering of antibody models by the structure of their CDRs.
  ☆19Updated 3 months ago
• WillHua127 / GENzyme
  Official repository of GENzyme
  ☆41Updated 2 months ago
• mit-ll / AlphaSeq_Antibody_Dataset
  Dataset with quantitative binding scores of scFv-format antibodies against SARS-CoV-2 target peptide
  ☆21Updated last year
• BEAM-Labs / BALM
  Inference code for Bio-Inspired Antibody Language Model
  ☆23Updated 5 months ago
• leeyang / DRfold
  ☆34Updated last year
• bcov77 / silent_tools
  A bunch of shell utilities for dealing the silent files
  ☆56Updated 2 months ago