Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"
☆30Oct 28, 2022Updated 3 years ago
Alternatives and similar repositories for dlab-public
Users that are interested in dlab-public are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Oct 27, 2021Updated 4 years ago
- Tool for modelling the CDRs of antibodies☆52Jan 19, 2023Updated 3 years ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆38Mar 18, 2023Updated 3 years ago
- ☆51Aug 21, 2023Updated 3 years ago
- BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…☆267May 13, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- AbLang: A language model for antibodies☆173Sep 22, 2023Updated 3 years ago
- ☆36Nov 4, 2021Updated 4 years ago
- Automatically exported from code.google.com/p/pyplif☆10Nov 23, 2018Updated 7 years ago
- test☆14Nov 13, 2020Updated 5 years ago
- A visualization software for antibody multi sequence alignment☆24Jun 15, 2024Updated 2 years ago
- Quantifying the nativeness of antibody sequences using long short-term memory networks☆18Dec 17, 2021Updated 4 years ago
- Code for the antibody deep learning paper.☆16Feb 28, 2022Updated 4 years ago
- ☆26May 14, 2019Updated 7 years ago
- open source repository☆149Nov 30, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆77Sep 2, 2020Updated 6 years ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆33Jul 8, 2024Updated 2 years ago
- Structural space exploration of AlphaFold DB☆13Oct 8, 2021Updated 5 years ago
- Efficient evolution from protein language models☆227Aug 26, 2023Updated 3 years ago
- Fine-tune AlphaFold 3, AlphaFold 2, Boltz-1, and Boltz-2 on downstream protein tasks. Algorithm notebooks and papers are the supporting l…☆29Updated this week
- ☆17Dec 10, 2025Updated 10 months ago
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆18Sep 10, 2024Updated 2 years ago
- Consensus pharmacophore for Drug Design☆15Aug 22, 2025Updated last year
- PyTorch implementation of Parapred (Liberis et al., 2018) with Paratyping (Richardson et al., 2021)☆20Aug 20, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- OPUS-Rota4: A Gradient-Based Protein Side-Chain Modeling Framework Assisted by Deep Learning-Based Predictors☆10Apr 14, 2022Updated 4 years ago
- Prediction of B-cell epitopes from amino acid sequences using deep neural networks.☆17Aug 3, 2021Updated 5 years ago
- ☆17Apr 28, 2020Updated 6 years ago
- ☆19Dec 10, 2022Updated 3 years ago
- ☆27Apr 10, 2025Updated last year
- ☆133Sep 5, 2022Updated 4 years ago
- DeepAAI☆36Dec 25, 2024Updated last year
- ☆42Jan 1, 2024Updated 2 years ago
- ☆17Feb 8, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- predict stability change upon mutation☆33Jun 28, 2024Updated 2 years ago
- Antigen-receptor Design Against Peptide-MHC Targets☆22Jan 9, 2026Updated 9 months ago
- a deep learning architecture for protein-ligand binding affinity prediction☆77Jan 21, 2024Updated 2 years ago
- Mol2vec notebooks for use with Binder service☆29Mar 24, 2018Updated 8 years ago
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆370Jun 29, 2023Updated 3 years ago
- Deep transformer for predicting interchain residue-residue distances of protein complexes☆14Mar 19, 2024Updated 2 years ago
- A deep-learning-based multiple toolkits (DeTool) approach that uses the inputs of enzymes and substrates for biocatalystic tasks.☆14Nov 24, 2023Updated 2 years ago